RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 RAD23BP54727 409 aa17.92■□□□□ 0.46
CD9-209ENST00000540891 SLC4A11Q8NBS3 891 aa17.92■□□□□ 0.46
CD9-209ENST00000540891 DEPDC1BQ8WUY9 529 aa17.92■□□□□ 0.46
CD9-209ENST00000540891 MRPS31Q92665 395 aaKnown RBP17.92■□□□□ 0.46
CD9-209ENST00000540891 E2F7Q96AV8 911 aa17.92■□□□□ 0.46
CD9-209ENST00000540891 CYFIP2Q96F07 1278 aa17.92■□□□□ 0.46
CD9-209ENST00000540891 TRMT61BQ9BVS5 477 aaKnown RBP17.92■□□□□ 0.46
CD9-209ENST00000540891 FAM124BQ9H5Z6 455 aaPredicted RBP17.92■□□□□ 0.46
CD9-209ENST00000540891 ARHGEF3Q9NR81 526 aa17.92■□□□□ 0.46
CD9-209ENST00000540891 C2orf78A6NCI8 922 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 ARNTLO00327 626 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 MBD3O95983 291 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 FCHO2Q0JRZ9 810 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 PPP1R26Q5T8A7 1209 aaPredicted RBP17.91■□□□□ 0.46
CD9-209ENST00000540891 SUGP1Q8IWZ8 645 aaKnown RBP17.91■□□□□ 0.46
CD9-209ENST00000540891 NUP93Q8N1F7 819 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 TTC39CQ8N584 583 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 SCAMP5Q8TAC9 235 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 RIN3Q8TB24 985 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 KAT5Q92993 513 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 USP13Q92995 863 aaPredicted RBP17.91■□□□□ 0.46
CD9-209ENST00000540891 TMEM176AQ96HP8 235 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 NT5C1BQ96P26 610 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 SLC22A12Q96S37 553 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 OBP2AQ9NY56 170 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 IL37Q9NZH6 218 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 GCNT4Q9P109 453 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 DACH1Q9UI36 760 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 ZMYM5Q9UJ78 669 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 CCL26Q9Y258 94 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 COL4A2P08572 1712 aa17.91■□□□□ 0.46
CD9-209ENST00000540891 KMT2EQ8IZD2 1858 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 ZNF840PA6NDX5 716 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 SHISA7A6NL88 538 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 FAM200BP0CF97 657 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 ACO1P21399 889 aaKnown RBP17.9■□□□□ 0.46
CD9-209ENST00000540891 AVPR2P30518 371 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 GDI1P31150 447 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 SLC5A3P53794 718 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 MAP3K7CLP57077 242 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 PFKPQ01813 784 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 IFRD2Q12894 506 aaPredicted RBP17.9■□□□□ 0.46
CD9-209ENST00000540891 TAF10Q12962 218 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 SLC44A4Q53GD3 710 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 CLEC20AQ6ZU45 233 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 ARHGEF19Q8IW93 802 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 TMEM105Q8N8V8 129 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 EHBP1Q8NDI1 1231 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 FLCNQ8NFG4 579 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 CYP2S1Q96SQ9 504 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 MFSD1Q9H3U5 465 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 THAP9Q9H5L6 903 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 BRD9Q9H8M2 597 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 ANAPC1Q9H1A4 1944 aa17.9■□□□□ 0.46
CD9-209ENST00000540891 ZNF318Q5VUA4 2279 aa17.89■□□□□ 0.46
CD9-209ENST00000540891 FAM92AA1XBS5 289 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 HHLA1C9JL84 531 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 PI15O43692 258 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 TBXAS1P24557 533 aaPredicted RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 YWHAQP27348 245 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 AVPR1AP37288 418 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 STARD6P59095 220 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 CETN1Q12798 172 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 MLF2Q15773 248 aaPredicted RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 CT47A1Q5JQC4 288 aaPredicted RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 ARHGAP17Q68EM7 881 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 ASTLQ6HA08 431 aaPredicted RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 GPRIN1Q7Z2K8 1008 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 CREBRFQ8IUR6 639 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 CELF5Q8N6W0 485 aaKnown RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 ARL14EPQ8N8R7 260 aaPredicted RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 DNASE1L2Q92874 299 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 HEXIM2Q96MH2 286 aaKnown RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 DDX23Q9BUQ8 820 aaKnown RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 INTS2Q9H0H0 1204 aaKnown RBP17.89■□□□□ 0.45
CD9-209ENST00000540891 TBC1D17Q9HA65 648 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 TRPC7Q9HCX4 862 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 TRPV5Q9NQA5 729 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 EHD2Q9NZN4 543 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 TRPM5Q9NZQ8 1165 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 TMEM63CQ9P1W3 806 aa17.89■□□□□ 0.45
CD9-209ENST00000540891 DPYSL4O14531 572 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 ZNF263O14978 683 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 CHADO15335 359 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 RTN3O95197 1032 aaPredicted RBP17.88■□□□□ 0.45
CD9-209ENST00000540891 TRIM21P19474 475 aaKnown RBP17.88■□□□□ 0.45
CD9-209ENST00000540891 AOC1P19801 751 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 CLCN5P51795 746 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 ZNF268Q14587 947 aaPredicted RBP17.88■□□□□ 0.45
CD9-209ENST00000540891 PHLDB3Q6NSJ2 640 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 RRAGAQ7L523 313 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 PPM1KQ8N3J5 372 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 BPIFB1Q8TDL5 484 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 IRF7Q92985 503 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 ZFYVE19Q96K21 471 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 DUSP16Q9BY84 665 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 HEBP1Q9NRV9 189 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 SAMSN1Q9NSI8 373 aaKnown RBP17.88■□□□□ 0.45
CD9-209ENST00000540891 TDP1Q9NUW8 608 aa17.88■□□□□ 0.45
CD9-209ENST00000540891 PATJQ8NI35 1801 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms