RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 SPATA6Q9NWH7 488 aaPredicted RBP22.46■■□□□ 1.19
PTMS-205ENST00000540828 NDRG2Q9UN36 371 aaKnown RBP22.46■■□□□ 1.19
PTMS-205ENST00000540828 OBSL1O75147 1896 aa22.45■■□□□ 1.19
PTMS-205ENST00000540828 TRAV19A0A0A6YYK7 116 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 GADD45BO75293 160 aaPredicted RBP22.45■■□□□ 1.18
PTMS-205ENST00000540828 USP17L7P0C7H9 530 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 FRMD5Q7Z6J6 570 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 ACOT1Q86TX2 421 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 SLC22A12Q96S37 553 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 TSG101Q99816 390 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 CYP3A43Q9HB55 503 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 APOBEC3GQ9HC16 384 aaKnown RBP22.45■■□□□ 1.18
PTMS-205ENST00000540828 GTSE1Q9NYZ3 720 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 TRPM5Q9NZQ8 1165 aa22.45■■□□□ 1.18
PTMS-205ENST00000540828 ATP8B3O60423 1300 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 SP9P0CG40 484 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 EPB41P11171 864 aaKnown RBP22.44■■□□□ 1.18
PTMS-205ENST00000540828 PFKLP17858 780 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 SOX9P48436 509 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 PPP3CCP48454 512 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 NDST1P52848 882 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 PMS1P54277 932 aaKnown RBP22.44■■□□□ 1.18
PTMS-205ENST00000540828 FKBP3Q00688 224 aaKnown RBP22.44■■□□□ 1.18
PTMS-205ENST00000540828 TNK2Q07912 1038 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 ZNF638Q14966 1978 aaKnown RBP22.44■■□□□ 1.18
PTMS-205ENST00000540828 KRT39Q6A163 491 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 RALGPS2Q86X27 583 aaPredicted RBP22.44■■□□□ 1.18
PTMS-205ENST00000540828 ARL14EPQ8N8R7 260 aaPredicted RBP22.44■■□□□ 1.18
PTMS-205ENST00000540828 RIN3Q8TB24 985 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 IMPG2Q9BZV3 1241 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 LMAN1LQ9HAT1 526 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 TRPC7Q9HCX4 862 aa22.44■■□□□ 1.18
PTMS-205ENST00000540828 C2orf78A6NCI8 922 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 ZNF840PA6NDX5 716 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 SPECC1L-ADORA2AF8WAN1 911 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 LAMTOR5O43504 91 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 STX10O60499 249 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 KINO60870 393 aaKnown RBP22.43■■□□□ 1.18
PTMS-205ENST00000540828 CHRNB1P11230 501 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 HDCP19113 662 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 CTHP32929 405 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 ITPRIPL2Q3MIP1 535 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 MAMSTRQ6ZN01 415 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 FAM35AQ86V20 835 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 FUKQ8N0W3 1084 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 NUP93Q8N1F7 819 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 TTC8Q8TAM2 541 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 KCNK16Q96T55 309 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 MED10Q9BTT4 135 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 MMRN2Q9H8L6 949 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.43■■□□□ 1.186e-8■■■■■ 57.6
PTMS-205ENST00000540828 HMGXB4Q9UGU5 601 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 MAN1B1Q9UKM7 699 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 FBXO4Q9UKT5 387 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 ANAPC1Q9H1A4 1944 aa22.43■■□□□ 1.18
PTMS-205ENST00000540828 SLC16A3O15427 465 aaKnown RBP22.42■■□□□ 1.18
PTMS-205ENST00000540828 CKMP06732 381 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 PDE6CP51160 858 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 LRRC63Q05C16 580 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 INCA1Q0VD86 236 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 TAF10Q12962 218 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 ISM2Q6H9L7 571 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 TXNDC11Q6PKC3 985 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 SEMA4DQ92854 862 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 DHTKD1Q96HY7 919 aaPredicted RBP22.42■■□□□ 1.18
PTMS-205ENST00000540828 FAXDC2Q96IV6 333 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 CHRDQ9H2X0 955 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 HPS4Q9NQG7 708 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 IL37Q9NZH6 218 aa22.42■■□□□ 1.18
PTMS-205ENST00000540828 TNFRSF10BO14763 440 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 GFRA3O60609 400 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 TCF3P15923 654 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 ORC1Q13415 861 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 RUNX3Q13761 415 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 PDGFRLQ15198 375 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 ZNF77Q15935 545 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 ZNF528Q3MIS6 628 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 CC2D1AQ6P1N0 951 aaPredicted RBP22.41■■□□□ 1.18
PTMS-205ENST00000540828 CCDC150Q8NCX0 1101 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 SMARCD1Q96GM5 515 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 IER2Q9BTL4 223 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 NIF3L1Q9GZT8 377 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 DMAP1Q9NPF5 467 aaPredicted RBP22.41■■□□□ 1.18
PTMS-205ENST00000540828 ARHGAP26Q9UNA1 814 aa22.41■■□□□ 1.18
PTMS-205ENST00000540828 TRIM49BA6NDI0 452 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 PSMA7O14818 248 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 AP1G2O75843 785 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 RTN3O95197 1032 aaPredicted RBP22.4■■□□□ 1.18
PTMS-205ENST00000540828 CD44P16070 742 aaKnown RBP22.4■■□□□ 1.18
PTMS-205ENST00000540828 YWHAQP27348 245 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 PPP1R2P41236 205 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 MXI1P50539 228 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 USP4Q13107 963 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 MTAPQ13126 283 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 STIM1Q13586 685 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 MTF1Q14872 753 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 TRIM68Q6AZZ1 485 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 ASCL5Q7RTU5 278 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 C12orf29Q8N999 325 aa22.4■■□□□ 1.18
PTMS-205ENST00000540828 FBXL13Q8NEE6 735 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms