RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 PSMD6Q15008 389 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 FBXO43Q4G163 708 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 MDH1BQ5I0G3 518 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 FOXD4L5Q5VV16 416 aaPredicted RBP15.09■□□□□ 0.01
SNHG1-213ENST00000540725 DENND5BQ6ZUT9 1274 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 UNC13DQ70J99 1090 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 XXYLT1Q8NBI6 393 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 MYCBPAPQ8TBZ2 947 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 SCFD1Q8WVM8 642 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 FOXD4L4Q8WXT5 416 aaPredicted RBP15.09■□□□□ 0.01
SNHG1-213ENST00000540725 CD101Q93033 1021 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 PCED1BQ96HM7 432 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 MRPL45Q9BRJ2 306 aaKnown RBP15.09■□□□□ 0.01
SNHG1-213ENST00000540725 SNX25Q9H3E2 840 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 MAGEF1Q9HAY2 307 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 TRPM5Q9NZQ8 1165 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 ARHGAP26Q9UNA1 814 aa15.09■□□□□ 0.01
SNHG1-213ENST00000540725 THADAQ6YHU6 1953 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 TRIM66O15016 1216 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 GDF9O60383 454 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 FOXD2O60548 495 aaPredicted RBP15.08■□□□□ 0
SNHG1-213ENST00000540725 TACC1O75410 805 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 CCDC192P0DO97 292 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 CASP1P29466 404 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 GNL1P36915 607 aaPredicted RBP15.08■□□□□ 0
SNHG1-213ENST00000540725 PDE6CP51160 858 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 SNRPFP62306 86 aaKnown RBP15.08■□□□□ 0
SNHG1-213ENST00000540725 EHHADHQ08426 723 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 NR1H3Q13133 447 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 HS2ST1Q7LGA3 356 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 CACNA2D4Q7Z3S7 1137 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 CAMKK1Q8N5S9 505 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 RPLP0P6Q8NHW5 317 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 EZH1Q92800 747 aaPredicted RBP15.08■□□□□ 0
SNHG1-213ENST00000540725 LOXL4Q96JB6 756 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 HHIPQ96QV1 700 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 TTLL2Q9BWV7 592 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 NME7Q9Y5B8 376 aa15.08■□□□□ 0
SNHG1-213ENST00000540725 GON4LQ3T8J9 2241 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 CEP295Q9C0D2 2601 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 LAMA1P25391 3075 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 F8VP50 259 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 AXIN1O15169 862 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 POLR2DO15514 142 aaKnown RBP15.07■□□□□ 0
SNHG1-213ENST00000540725 AKAP3O75969 853 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 EPN2O95208 641 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 PFKLP17858 780 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 TNNC1P63316 161 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 WDR72Q3MJ13 1102 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
SNHG1-213ENST00000540725 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
SNHG1-213ENST00000540725 KBTBD6Q86V97 674 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 OR6B3Q8NGW1 331 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 C8orf48Q96LL4 319 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 GZF1Q9H116 711 aaPredicted RBP15.07■□□□□ 0
SNHG1-213ENST00000540725 BLZF1Q9H2G9 400 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 ARRDC1-AS1Q9H2J1 176 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 LINC00597Q9H2U6 94 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 EHD2Q9NZN4 543 aa15.07■□□□□ 0
SNHG1-213ENST00000540725 KMT2BQ9UMN6 2715 aaPredicted RBP15.06■□□□□ 0
SNHG1-213ENST00000540725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.06■□□□□ 0
SNHG1-213ENST00000540725 NFATC1O95644 943 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 FAM163BP0C2L3 166 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 PTPN1P18031 435 aaKnown RBP15.06■□□□□ 0
SNHG1-213ENST00000540725 RAP1GAPP47736 663 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 MYL6P60660 151 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 NOP14P78316 857 aaKnown RBP15.06■□□□□ 0
SNHG1-213ENST00000540725 ZXDBP98169 803 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 PSMD2Q13200 908 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 TRPC3Q13507 836 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 BMT2Q1RMZ1 405 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 SYT13Q7L8C5 426 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 C12orf56Q8IXR9 622 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 ZNF516Q92618 1163 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 ACDQ96AP0 544 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 ELOVL4Q9GZR5 314 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 DPEP3Q9H4B8 488 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 SLC39A2Q9NP94 309 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 TMEM30AQ9NV96 361 aa15.06■□□□□ 0
SNHG1-213ENST00000540725 CGNQ9P2M7 1197 aaKnown RBP15.06■□□□□ 0
SNHG1-213ENST00000540725 PVALEFA0A1B0GWK0 134 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 ZNF840PA6NDX5 716 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 LEFTY2O00292 366 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 STAU1O95793 577 aaKnown RBP15.05■□□□□ -0
SNHG1-213ENST00000540725 PPP3CCP48454 512 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 CACNA2D1P54289 1103 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 SLC7A9P82251 487 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 DMC1Q14565 340 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 SF3A2Q15428 464 aaKnown RBP15.05■□□□□ -0
SNHG1-213ENST00000540725 CCDC6Q16204 474 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 AASDHQ4L235 1098 aaPredicted RBP15.05■□□□□ -0
SNHG1-213ENST00000540725 PPM1JQ5JR12 505 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 SNX21Q969T3 373 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 ZNF518BQ9C0D4 1074 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 XYLT2Q9H1B5 865 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 NXF1Q9UBU9 619 aaKnown RBP15.05■□□□□ -0
SNHG1-213ENST00000540725 PCDHA7Q9UN72 937 aa15.05■□□□□ -0
SNHG1-213ENST00000540725 A8MXQ7 604 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms