RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 FCHO2Q0JRZ9 810 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 IFRD2Q12894 506 aaPredicted RBP16■□□□□ 0.15
UBE3B-212ENST00000540230 TRIM59Q8IWR1 403 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 CCDC150Q8NCX0 1101 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 MRPS31Q92665 395 aaKnown RBP16■□□□□ 0.15
UBE3B-212ENST00000540230 USP13Q92995 863 aaPredicted RBP16■□□□□ 0.15
UBE3B-212ENST00000540230 ZFYVE19Q96K21 471 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 SMOQ99835 787 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 NUP62CLQ9H1M0 184 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 TRPC7Q9HCX4 862 aa16■□□□□ 0.15
UBE3B-212ENST00000540230 STK25O00506 426 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 AP1G2O75843 785 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 ADORA2BP29275 332 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 WEE1P30291 646 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 STARD6P59095 220 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 PFKPQ01813 784 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 LRMPQ12912 555 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 DPCR1Q3MIW9 517 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 MON1AQ86VX9 555 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 SMARCD1Q96GM5 515 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 CYP2S1Q96SQ9 504 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 NT5C1AQ9BXI3 368 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 CISHQ9NSE2 258 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 RWDD2AQ9UIY3 292 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 MTF2Q9Y483 593 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-212ENST00000540230 HELZP42694 1942 aaKnown RBP15.99■□□□□ 0.15
UBE3B-212ENST00000540230 DPYSL4O14531 572 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 TNFRSF10BO14763 440 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 ZNF263O14978 683 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 DDX6P26196 483 aaKnown RBP eCLIP15.99■□□□□ 0.15
UBE3B-212ENST00000540230 MARSP56192 900 aaKnown RBP15.99■□□□□ 0.15
UBE3B-212ENST00000540230 TCF15Q12870 199 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 WDR44Q5JSH3 913 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 PHLDB3Q6NSJ2 640 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 TPRG1Q6ZUI0 275 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 SCAMP5Q8TAC9 235 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 LMO3Q8TAP4 145 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 DNASE1L2Q92874 299 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 E2F7Q96AV8 911 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 CEP295NLQ96MC4 621 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 GBP4Q96PP9 640 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 DDX23Q9BUQ8 820 aaKnown RBP15.99■□□□□ 0.15
UBE3B-212ENST00000540230 DMAP1Q9NPF5 467 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-212ENST00000540230 GCNT4Q9P109 453 aa15.99■□□□□ 0.15
UBE3B-212ENST00000540230 MIA3Q5JRA6 1907 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 F5P12259 2224 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 ATP8B3O60423 1300 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 DCNP07585 359 aaKnown RBP15.98■□□□□ 0.15
UBE3B-212ENST00000540230 GLULP15104 373 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 AVPR1AP37288 418 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 SLC5A3P53794 718 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 RAD23BP54727 409 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 MAP3K7CLP57077 242 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 PRKCQQ04759 706 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 TAF10Q12962 218 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 CLEC20AQ6ZU45 233 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 GPRIN1Q7Z2K8 1008 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 NUP93Q8N1F7 819 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 ARL14EPQ8N8R7 260 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-212ENST00000540230 SLC4A11Q8NBS3 891 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 BPIFB1Q8TDL5 484 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 IRF7Q92985 503 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 CYFIP2Q96F07 1278 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 HNRNPABQ99729 332 aaKnown RBP15.98■□□□□ 0.15
UBE3B-212ENST00000540230 CSNK1G1Q9HCP0 422 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 OBP2AQ9NY56 170 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 MYO16Q9Y6X6 1858 aa15.98■□□□□ 0.15
UBE3B-212ENST00000540230 KANSL1LA0AUZ9 987 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 ZNF840PA6NDX5 716 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 CHADO15335 359 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 RFX1P22670 979 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 SOX9P48436 509 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 ZXDBP98169 803 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 TNK2Q07912 1038 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 KCNH2Q12809 1159 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 CUL2Q13617 745 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 PPP1R26Q5T8A7 1209 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-212ENST00000540230 IRF2BP1Q8IU81 584 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 YAF2Q8IY57 180 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 CELF5Q8N6W0 485 aaKnown RBP15.97■□□□□ 0.15
UBE3B-212ENST00000540230 UBR7Q8N806 425 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 MLKLQ8NB16 471 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 PJA1Q8NG27 643 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 TTC8Q8TAM2 541 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 KAT5Q92993 513 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 FAXDC2Q96IV6 333 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 CNOT6LQ96LI5 555 aaKnown RBP15.97■□□□□ 0.15
UBE3B-212ENST00000540230 TRPV5Q9NQA5 729 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 TDP1Q9NUW8 608 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 DLGAP2Q9P1A6 1054 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 ZMYM5Q9UJ78 669 aa15.97■□□□□ 0.15
UBE3B-212ENST00000540230 HHLA1C9JL84 531 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 PMM2O15305 246 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 GNA14O95837 355 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 CKMP06732 381 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 TARSP26639 723 aaKnown RBP15.96■□□□□ 0.15
UBE3B-212ENST00000540230 PGFP49763 221 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 UBXN2BQ14CS0 331 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 TRIM68Q6AZZ1 485 aa15.96■□□□□ 0.15
UBE3B-212ENST00000540230 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms