RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ATP8B3O60423 1300 aa19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 NUP210Q8TEM1 1887 aaPredicted RBP19.41■□□□□ 0.7
SNRPA1-203ENST00000540017 C2orf78A6NCI8 922 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 PSMC3P17980 439 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 WEE1P30291 646 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 VCPP55072 806 aaKnown RBP19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 MAP3K7CLP57077 242 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 IFRD2Q12894 506 aaPredicted RBP19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 HSP90AA4PQ58FG1 418 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 MON1AQ86VX9 555 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 ARHGEF19Q8IW93 802 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 MFSD6LQ8IWD5 586 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 NUP93Q8N1F7 819 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 MRPS31Q92665 395 aaKnown RBP19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 TMEM176AQ96HP8 235 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 HEXIM2Q96MH2 286 aaKnown RBP19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 NT5C1BQ96P26 610 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 CYP2S1Q96SQ9 504 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 TRMT61BQ9BVS5 477 aaKnown RBP19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 THAP9Q9H5L6 903 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 DACH1Q9UI36 760 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 CCL26Q9Y258 94 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 ANAPC1Q9H1A4 1944 aa19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 ZNF638Q14966 1978 aaKnown RBP19.4■□□□□ 0.7
SNRPA1-203ENST00000540017 COL9A1P20849 921 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 DDX6P26196 483 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 SLC5A3P53794 718 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 TAF10Q12962 218 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 TPD52L1Q16890 204 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 CCDC183Q5T5S1 534 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 CWF19L1Q69YN2 538 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 CLEC20AQ6ZU45 233 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 GPRIN1Q7Z2K8 1008 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 TTC39CQ8N584 583 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 RIN3Q8TB24 985 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 USP13Q92995 863 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 INTS2Q9H0H0 1204 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 TRPC7Q9HCX4 862 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 SAMSN1Q9NSI8 373 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 IL37Q9NZH6 218 aa19.39■□□□□ 0.69
SNRPA1-203ENST00000540017 HHLA1C9JL84 531 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 FAM200BP0CF97 657 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 ACO1P21399 889 aaKnown RBP19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 GDI1P31150 447 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 CETN1Q12798 172 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 PHLDB3Q6NSJ2 640 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 C11orf57Q6ZUT1 292 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 RRAGAQ7L523 313 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 PPM1KQ8N3J5 372 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 DEPDC1BQ8WUY9 529 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 E2F7Q96AV8 911 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 CRACR2AQ9BSW2 395 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 FAM124BQ9H5Z6 455 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 ARHGEF3Q9NR81 526 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 GCNT4Q9P109 453 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 WDFY4Q6ZS81 3184 aa19.38■□□□□ 0.69
SNRPA1-203ENST00000540017 ZNF840PA6NDX5 716 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 RNF225M0QZC1 329 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 ARNTLO00327 626 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 DPYSL4O14531 572 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 PI15O43692 258 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 TBXAS1P24557 533 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 YWHAQP27348 245 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 AVPR1AP37288 418 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 MTIF2P46199 727 aaKnown RBP19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 APBA1Q02410 837 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 FCHO2Q0JRZ9 810 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 SLC44A4Q53GD3 710 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 CT47A1Q5JQC4 288 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 ARL14EPQ8N8R7 260 aaPredicted RBP19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 FLCNQ8NFG4 579 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 JAKMIP2Q96AA8 810 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 KREMEN1Q96MU8 473 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 MFSD1Q9H3U5 465 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 BRD9Q9H8M2 597 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 OBP2AQ9NY56 170 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 TRPM5Q9NZQ8 1165 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 ZMYM5Q9UJ78 669 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 COL4A2P08572 1712 aa19.37■□□□□ 0.69
SNRPA1-203ENST00000540017 MYH10P35580 1976 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 SHISA7A6NL88 538 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 SOBPA7XYQ1 873 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 RTN3O95197 1032 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 CALCAP01258 141 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 TRIM21P19474 475 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 SLC9A1P19634 815 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 AVPR2P30518 371 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 PGFP49763 221 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 MIIPQ5JXC2 388 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 SASS6Q6UVJ0 657 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 SUGP1Q8IWZ8 645 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 CELF5Q8N6W0 485 aaKnown RBP19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 TMEM105Q8N8V8 129 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 FBXO32Q969P5 355 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 ZFYVE19Q96K21 471 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 DUSP16Q9BY84 665 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 TBC1D17Q9HA65 648 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 HEBP1Q9NRV9 189 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 TDP1Q9NUW8 608 aa19.36■□□□□ 0.69
SNRPA1-203ENST00000540017 EHD2Q9NZN4 543 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms