RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 DCLRE1AQ6PJP8 1040 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 SPRED2Q7Z698 418 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 C12orf40Q86WS4 652 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 ZDHHC13Q8IUH4 622 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 C12orf56Q8IXR9 622 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 SLC39A11Q8N1S5 342 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 GUF1Q8N442 669 aaKnown RBP6.43□□□□□ -1.38
DDB1-210ENST00000538129 KIAA0895Q8NCT3 520 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 SPPL3Q8TCT6 385 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 SMARCE1Q969G3 411 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 MRPL38Q96DV4 380 aaKnown RBP6.43□□□□□ -1.38
DDB1-210ENST00000538129 IGSF21Q96ID5 467 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 SNX27Q96L92 541 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 UROC1Q96N76 676 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 PPP1R10Q96QC0 940 aaKnown RBP6.43□□□□□ -1.38
DDB1-210ENST00000538129 ASB7Q9H672 318 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 RPF1Q9H9Y2 349 aaKnown RBP6.43□□□□□ -1.38
DDB1-210ENST00000538129 STXBP5LQ9Y2K9 1186 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 DERAQ9Y315 318 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 PCDHA5Q9Y5H7 936 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 KIAA1671Q9BY89 1806 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 BRWD1Q9NSI6 2320 aa6.43□□□□□ -1.38
DDB1-210ENST00000538129 PRAMEF27A3QJZ7 478 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 ZNF233A6NK53 670 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 LACTBL1A8MY62 500 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 TISP43B9A030 160 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 GRM6O15303 877 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 MEFVO15553 781 aaPredicted RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 CYP26A1O43174 497 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 XPOTO43592 962 aaKnown RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 ZC3H11AO75152 810 aaKnown RBP eCLIP6.42□□□□□ -1.38
DDB1-210ENST00000538129 TADA2AO75478 443 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 IL18RAPO95256 599 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 ITGB1P05556 798 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 FOSL2P15408 326 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 PAX3P23760 479 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 PPP1R2P41236 205 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 OR1G1P47890 313 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 SLC11A1P49279 550 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 ACOT2P49753 483 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 LMNB2Q03252 620 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 BMS1Q14692 1282 aaKnown RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 SURF1Q15526 300 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 SEZ6Q53EL9 994 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 PPM1JQ5JR12 505 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 WIPI1Q5MNZ9 446 aaPredicted RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 ZBTB41Q5SVQ8 909 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 ARMCX5Q6P1M9 558 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 CRELD2Q6UXH1 353 aaPredicted RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 DDX53Q86TM3 631 aaKnown RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 NELFCDQ8IXH7 590 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 GPD1LQ8N335 351 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 TRIML1Q8N9V2 468 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 XXYLT1Q8NBI6 393 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 POF1BQ8WVV4 589 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 MYLIPQ8WY64 445 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 TMEM169Q96HH4 297 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 FBXL18Q96ME1 805 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 ZMAT2Q96NC0 199 aaKnown RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 TMEM74Q96NL1 305 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 CBWD1Q9BRT8 395 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 FAM213AQ9BRX8 229 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 CXCL16Q9H2A7 254 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 IKZF4Q9H2S9 585 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 KCTD10Q9H3F6 313 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 PIF1Q9H611 641 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 ALG13Q9NP73 1137 aaKnown RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 NGRNQ9NPE2 291 aaKnown RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 AGPAT3Q9NRZ7 376 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 PCMTD2Q9NV79 361 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 DMAC2Q9NW81 257 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 HSPBP1Q9NZL4 362 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 DNAJB4Q9UDY4 337 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 TRAF3IP3Q9Y228 551 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 MTCH2Q9Y6C9 303 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 ANK1P16157 1881 aa6.42□□□□□ -1.38
DDB1-210ENST00000538129 PDCD11Q14690 1871 aaKnown RBP6.42□□□□□ -1.38
DDB1-210ENST00000538129 NT5C1B-RDH14C9J2C7 533 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 TMEM189-UBE2V1I3L0A0 370 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 TRAPPC3O43617 180 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 NCK2O43639 380 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 CALUO43852 315 aaPredicted RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 B4GALT3O60512 393 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 EFEMP2O95967 443 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 F13BP05160 661 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 CXCL8P10145 99 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 DNAJB1P25685 340 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 RPL13P26373 211 aaKnown RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 LRPAP1P30533 357 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 PBX3P40426 434 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 TNFSF9P41273 254 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 ERVFC1P60507 584 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 ELAVL2Q12926 359 aaKnown RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 STIM1Q13586 685 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 CAMK1Q14012 370 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 MORC3Q14149 939 aa6.41□□□□□ -1.38
DDB1-210ENST00000538129 SNRNP35Q16560 246 aaKnown RBP6.41□□□□□ -1.38
DDB1-210ENST00000538129 CAMK4Q16566 473 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms