RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 CLIP2Q9UDT6 1046 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 SERPINB13Q9UIV8 391 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 HOOK1Q9UJC3 728 aaKnown RBP4.83□□□□□ -1.64
GYPA-211ENST00000535709 SLC39A10Q9ULF5 831 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 EMC9Q9Y3B6 208 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 NOC2LQ9Y3T9 749 aaKnown RBP4.83□□□□□ -1.64
GYPA-211ENST00000535709 TRAF6Q9Y4K3 522 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 PCDHA11Q9Y5I1 949 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 N6AMT1Q9Y5N5 214 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 RGPD5Q99666 1765 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 NHSL1Q5SYE7 1610 aa4.83□□□□□ -1.64
GYPA-211ENST00000535709 MED1Q15648 1581 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 COL3A1P02461 1466 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 OVOS2A0A0J9YW53 1432 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 OVOS2Q6IE36 1432 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 KTN1Q86UP2 1357 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 A0A088AWK7 358 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 PTPDC1A2A3K4 754 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CCDC151A5D8V7 595 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 KRT87PA6NCN2 255 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ZNF503-AS2A6NEH8 195 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 DBX1A6NMT0 343 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 LACTBL1A8MY62 500 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 TRIM38O00635 465 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 POLR3GO15318 223 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 PHGDHO43175 533 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 SLITRK3O94933 977 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CKMP06732 381 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 MMEP08473 750 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 PDHA1P08559 390 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CSF1P09603 554 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 PTPN2P17706 415 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ARF4P18085 180 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 EEF1DP29692 281 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 AKT1P31749 480 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 GNL1P36915 607 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 CCR9P51686 369 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ZNF41P51814 821 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 KIF11P52732 1056 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ARFIP1P53367 373 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 SLC16A1P53985 500 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 STARD6P59095 220 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 MC1RQ01726 317 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 MESP2Q0VG99 397 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 PRPF4BQ13523 1007 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 NAA25Q14CX7 972 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 SEC23AQ15436 765 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 TARBP2Q15633 366 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 FAM26FQ5R3K3 315 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 SLC35F1Q5T1Q4 408 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CCDC183Q5T5S1 534 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ATPAF1Q5TC12 328 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 MAP3K21Q5TCX8 1036 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CNKSR3Q6P9H4 555 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 RSPO2Q6UXX9 243 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 CCDC186Q7Z3E2 898 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ZNF804AQ7Z570 1209 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CDH24Q86UP0 819 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ZNF610Q8N9Z0 462 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 KCTD6Q8NC69 237 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CYP2W1Q8TAV3 490 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 FAM71BQ8TC56 605 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 SH3RF3Q8TEJ3 882 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 FAM216AQ8WUB2 273 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 DEPDC1BQ8WUY9 529 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 RNF141Q8WVD5 230 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 THAP4Q8WY91 577 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ATP6V0A1Q93050 837 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 UBE2FQ969M7 185 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ZNF566Q969W8 418 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ZNF653Q96CK0 615 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 FAM120BQ96EK7 910 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 C1orf159Q96HA4 380 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 COG3Q96JB2 828 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 SLC6A18Q96N87 628 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 TTPALQ9BTX7 342 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 MAK16Q9BXY0 300 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 GPR62Q9BZJ7 368 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ZDHHC5Q9C0B5 715 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 COPS7BQ9H9Q2 264 aaPredicted RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 EIF2B3Q9NR50 452 aaKnown RBP4.82□□□□□ -1.64
GYPA-211ENST00000535709 USP40Q9NVE5 1235 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 QPCTLQ9NXS2 382 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.82□□□□□ -1.64
GYPA-211ENST00000535709 CALCOCO1Q9P1Z2 691 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 WHRNQ9P202 907 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 CACNG4Q9UBN1 327 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 TUBD1Q9UJT1 453 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 FEM1BQ9UK73 627 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 KCNH3Q9ULD8 1083 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 PCDHGB4Q9UN71 923 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 RGPD2P0DJD1 1756 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 COL18A1P39060 1754 aa4.82□□□□□ -1.64
GYPA-211ENST00000535709 ROBO1Q9Y6N7 1651 aa4.81□□□□□ -1.64
GYPA-211ENST00000535709 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.81□□□□□ -1.64
GYPA-211ENST00000535709 A0A0G2JPF8 293 aa4.81□□□□□ -1.64
GYPA-211ENST00000535709 AGAP14A8MT82 685 aa4.81□□□□□ -1.64
GYPA-211ENST00000535709 ISM1B1AKI9 464 aa4.81□□□□□ -1.64
GYPA-211ENST00000535709 HNRNPCL3B7ZW38 293 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms