RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZIK1Q3SY52 487 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-205ENST00000535375 AARS2Q5JTZ9 985 aaKnown RBP6.25□□□□□ -1.41
PRKDC-205ENST00000535375 PCID2Q5JVF3 399 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 CEP85Q6P2H3 762 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 PARS2Q7L3T8 475 aaKnown RBP6.25□□□□□ -1.41
PRKDC-205ENST00000535375 TBC1D5Q92609 795 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 TRIM43Q96BQ3 446 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-205ENST00000535375 APIPQ96GX9 242 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 STK31Q9BXU1 1019 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 DLL3Q9NYJ7 618 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 HDAC9Q9UKV0 1011 aa6.25□□□□□ -1.41
PRKDC-205ENST00000535375 MBD3L4A6NDZ8 208 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-205ENST00000535375 MBD3L3A6NE82 208 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-205ENST00000535375 JTBO76095 146 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 CSF1RP07333 972 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 ENGP17813 658 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 KLRC1P26715 233 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 PEX2P28328 305 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 ADORA2AP29274 412 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 FMO1Q01740 532 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 C3orf38Q5JPI3 329 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 PTF1AQ7RTS3 328 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 MICU3Q86XE3 530 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 IZUMO1Q8IYV9 350 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 ABRAQ8N0Z2 381 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 RP9Q8TA86 221 aaKnown RBP6.24□□□□□ -1.41
PRKDC-205ENST00000535375 NTN5Q8WTR8 489 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-205ENST00000535375 MAML1Q92585 1016 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 NMD3Q96D46 503 aaKnown RBP6.24□□□□□ -1.41
PRKDC-205ENST00000535375 BHMT2Q9H2M3 363 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 GBA2Q9HCG7 927 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-205ENST00000535375 STK32BQ9NY57 414 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 SH3BP4Q9P0V3 963 aa6.24□□□□□ -1.41
PRKDC-205ENST00000535375 LOC102723971A0A1B0GUV8 181 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 H0YIZ8 118 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 PSMD9O00233 223 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 RASAL1O95294 804 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 ERBB2P04626 1255 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 NPSP0C0P6 89 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 PCSK6P29122 969 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 CCNIQ14094 377 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 CERCAMQ5T4B2 595 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 CACHD1Q5VU97 1274 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 FCRLBQ6BAA4 426 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 ZNF788Q6ZQV5 615 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 OR56A3Q8NH54 315 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 SMCR8Q8TEV9 937 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-205ENST00000535375 TMEM171Q8WVE6 324 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 TTC17Q96AE7 1141 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 XPNPEP3Q9NQH7 507 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 DUSP22Q9NRW4 184 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 ADAM21Q9UKJ8 722 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 TBC1D30Q9Y2I9 924 aa6.23□□□□□ -1.41
PRKDC-205ENST00000535375 TARM1B6A8C7 271 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 PRKCBP05771 671 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 RHCEP18577 417 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 RHDQ02161 417 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 PTCHD3Q3KNS1 767 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 ZDHHC24Q6UX98 284 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 CAND1Q86VP6 1230 aaKnown RBP6.22□□□□□ -1.41
PRKDC-205ENST00000535375 ABHD11Q8NFV4 315 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 IPCEF1Q8WWN9 437 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-205ENST00000535375 SOCS4Q8WXH5 440 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 ITGB1BP2Q9UKP3 347 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 ADAMTS5Q9UNA0 930 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 CDY1Q9Y6F8 540 aa6.22□□□□□ -1.41
PRKDC-205ENST00000535375 POLR2AP24928 1970 aaKnown RBP6.21□□□□□ -1.42
PRKDC-205ENST00000535375 MANSC4A6NHS7 340 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-205ENST00000535375 RBMXL2O75526 392 aaKnown RBP6.21□□□□□ -1.42
PRKDC-205ENST00000535375 ZNF37AP17032 561 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-205ENST00000535375 RPL17P18621 184 aaKnown RBP6.21□□□□□ -1.42
PRKDC-205ENST00000535375 MTHFSP49914 203 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 RPS16P62249 146 aaKnown RBP6.21□□□□□ -1.42
PRKDC-205ENST00000535375 SLC29A2Q14542 456 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 LY6KQ17RY6 165 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 TMEM119Q4V9L6 283 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 YAF2Q8IY57 180 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 DNAJB14Q8TBM8 379 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 HASPINQ8TF76 798 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 C17orf80Q9BSJ5 609 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 NUP62CLQ9H1M0 184 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 USP22Q9UPT9 525 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 PCDHGB6Q9Y5F9 930 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 SNX14Q9Y5W7 946 aa6.21□□□□□ -1.42
PRKDC-205ENST00000535375 CCP110O43303 1012 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 SRGAP2O75044 1071 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 INMTO95050 263 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 PRKCGP05129 697 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 PTDSS1P48651 473 aaKnown RBP6.2□□□□□ -1.42
PRKDC-205ENST00000535375 ITGA8P53708 1063 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 BCAT1P54687 386 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 ARHGEF7Q14155 803 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 SLC9A4Q6AI14 798 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 MTHFD1LQ6UB35 978 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 NAPRTQ6XQN6 538 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 Q6ZWC4 215 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 DGKHQ86XP1 1220 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 RAB11FIP4Q86YS3 637 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 FSD1LQ9BXM9 530 aa6.2□□□□□ -1.42
PRKDC-205ENST00000535375 SNX13Q9Y5W8 968 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms