RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 TJP2Q9UDY2 1190 aa14.07□□□□□ -0.16
BEST1-208ENST00000534553 ASIC3Q9UHC3 531 aa14.07□□□□□ -0.16
BEST1-208ENST00000534553 USP18Q9UMW8 372 aa14.07□□□□□ -0.16
BEST1-208ENST00000534553 SCN1AP35498 2009 aa14.07□□□□□ -0.16
BEST1-208ENST00000534553 THSD7BQ9C0I4 1608 aa14.07□□□□□ -0.16
BEST1-208ENST00000534553 ARHGEF37A1IGU5 675 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 GABRDO14764 452 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 AOC2O75106 756 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 ATF2P15336 505 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 ELNP15502 786 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 PDGFRAP16234 1089 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 SDC4P31431 198 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 PDE4CQ08493 712 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 BYSLQ13895 437 aaKnown RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 PMF1Q6P1K2 205 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 MAP7D3Q8IWC1 876 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 FAM76AQ8TAV0 307 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 NKD2Q969F2 451 aaPredicted RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 TXLNGYQ9BZA5 131 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 FAM204AQ9H8W3 233 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 RSAD1Q9HA92 442 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 FAM49BQ9NUQ9 324 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 PADI3Q9ULW8 664 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 A0A0U1RQF3 1178 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 ARL5CA6NH57 179 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 HMGB1P1B2RPK0 211 aaPredicted RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 CYB561D2O14569 222 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 XPO1O14980 1071 aaKnown RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 LIASO43766 372 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 PRPSAP2O60256 369 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 NUDT17P0C025 328 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 KDELR1P24390 212 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 MIPP30301 263 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 MLH1P40692 756 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 KCNJ1P48048 391 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 ACLYP53396 1101 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 BOLA3Q53S33 107 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 BBS12Q6ZW61 710 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 SLC26A9Q7LBE3 791 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 EMC1Q8N766 993 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 SLAIN1Q8ND83 568 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 UBLCP1Q8WVY7 318 aaPredicted RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 TEKT4Q8WW24 435 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 RXFP2Q8WXD0 754 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 PIK3R5Q8WYR1 880 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 WNT8BQ93098 351 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 UROC1Q96N76 676 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 HNRNPABQ99729 332 aaKnown RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 HERPUD2Q9BSE4 406 aa14.06□□□□□ -0.16
BEST1-208ENST00000534553 PABPC3Q9H361 631 aaKnown RBP14.06□□□□□ -0.16
BEST1-208ENST00000534553 GRIN2DO15399 1336 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 ZNF487B1APH4 448 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 TRUB2O95900 331 aaKnown RBP14.05□□□□□ -0.16
BEST1-208ENST00000534553 ITGAVP06756 1048 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 MYZAPP0CAP1 466 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 RARGP13631 454 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 TCF4P15884 667 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 PTPN9P43378 593 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 PMS2P54278 862 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 SNX1Q13596 522 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 DSC3Q14574 896 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 PDK2Q15119 407 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 KCTD6Q8NC69 237 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 GSTCDQ8NEC7 633 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 ATG4AQ8WYN0 398 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 RAPGEF5Q92565 580 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 ZFP42Q96MM3 310 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 GAD1Q99259 594 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 GOLGA2P5Q9HBQ8 144 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 NME7Q9Y5B8 376 aa14.05□□□□□ -0.16
BEST1-208ENST00000534553 C3orf70A6NLC5 250 aaPredicted RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 PI4K2BG5E9Z4 385 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 FGFR1P11362 822 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 VCPP55072 806 aaKnown RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 GRIK3Q13003 919 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 TFDP2Q14188 446 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 UAP1Q16222 522 aaPredicted RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 ATP13A4Q4VNC1 1196 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 EFHC1Q5JVL4 640 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 KAZNQ674X7 775 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 TRMT10CQ7L0Y3 403 aaKnown RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 GSTA5Q7RTV2 222 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 HOOK3Q86VS8 718 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 ARFGAP1Q8N6T3 406 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 RIN2Q8WYP3 895 aaPredicted RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 SENP8Q96LD8 212 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 DPEP3Q9H4B8 488 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 ZWILCHQ9H900 591 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 KLHL11Q9NVR0 708 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 R3HDM2Q9Y2K5 976 aaKnown RBP14.04□□□□□ -0.16
BEST1-208ENST00000534553 ATP8A1Q9Y2Q0 1164 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 NEU2Q9Y3R4 380 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 APOC4-APOC2K7ER74 178 aa14.04□□□□□ -0.16
BEST1-208ENST00000534553 MDM4O15151 490 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms