RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 SFRP4Q6FHJ7 346 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-219ENST00000534049 PSD4Q8NDX1 1056 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 TFAP2BQ92481 460 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 CDK5RAP3Q96JB5 506 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 TINAGL1Q9GZM7 467 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-219ENST00000534049 KLK15Q9H2R5 256 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 MRPL46Q9H2W6 279 aaKnown RBP4.9□□□□□ -1.63
ITGB1-219ENST00000534049 ARPP21Q9UBL0 812 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-219ENST00000534049 ANKRD6Q9Y2G4 727 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 RIPOR2Q9Y4F9 1068 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 SYNMO15061 1565 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 TNRQ92752 1358 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 PTPN23Q9H3S7 1636 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 ERBINQ96RT1 1412 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 CEP152O94986 1710 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 EFCAB6Q5THR3 1501 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 DUOX2Q9NRD8 1548 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 WDR27A2RRH5 827 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 ANKRD62A6NC57 917 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 MATN4O95460 622 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 TTLL1O95922 423 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 CT47B1P0C2W7 299 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 TYRP14679 529 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 CD6P30203 668 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 SARNPP82979 210 aaKnown RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 CCDC157Q569K6 752 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 LRCH2Q5VUJ6 765 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 KIAA1614Q5VZ46 1190 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 PPP1R32Q7Z5V6 425 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 NSUN7Q8NE18 718 aaKnown RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF384Q8TF68 577 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 ATRIPQ8WXE1 791 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 TNPO1Q92973 898 aaKnown RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 MVB12AQ96EY5 273 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 MOGAT1Q96PD6 335 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 PPP1R9BQ96SB3 815 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 MAP3K14Q99558 947 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 TPSD1Q9BZJ3 242 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 UPF2Q9HAU5 1272 aaKnown RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 SLAMF7Q9NQ25 335 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 PNPOQ9NVS9 261 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 EHD3Q9NZN3 535 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 VSX1Q9NZR4 365 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 OGFRQ9NZT2 677 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 NR2E3Q9Y5X4 410 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 RAD54BQ9Y620 910 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF335Q9H4Z2 1342 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 SETD1BQ9UPS6 1966 aaKnown RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 IBTKQ9P2D0 1353 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-219ENST00000534049 ABCC5O15440 1437 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 DAPK1P53355 1430 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 FGD6Q6ZV73 1430 aa4.89□□□□□ -1.63
ITGB1-219ENST00000534049 MED14O60244 1454 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 CPS1P31327 1500 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 LMTK2Q8IWU2 1503 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 UGGT1Q9NYU2 1555 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 hCG_2014768A0A024R1R8 64 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 LRRC14BA6NHZ5 514 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 ADM5C9JUS6 153 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 FRAT2O75474 233 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-219ENST00000534049 TPM3P06753 285 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 CHRM2P08172 466 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 PEX19P40855 299 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 CD151P48509 253 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 PTH2RP49190 550 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 MAP2K6P52564 334 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 BMPR2Q13873 1038 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 COLEC12Q5KU26 742 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 FAM160B1Q5W0V3 765 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 USP37Q86T82 979 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 TBC1D22AQ8WUA7 517 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 FKBP10Q96AY3 582 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 FAM136AQ96C01 138 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 LRIG1Q96JA1 1093 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 TEX13AQ9BXU3 409 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-219ENST00000534049 CPNE5Q9HCH3 593 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 SARS2Q9NP81 518 aaKnown RBP4.88□□□□□ -1.63
ITGB1-219ENST00000534049 AASDHPPTQ9NRN7 309 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 CNNM1Q9NRU3 951 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 WNT6Q9Y6F9 365 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 IQGAP1P46940 1657 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 RNF123Q5XPI4 1314 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 UBR1Q8IWV7 1749 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 KIF15Q9NS87 1388 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 ADGRL2O95490 1459 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 ARHGAP23Q9P227 1491 aa4.88□□□□□ -1.63
ITGB1-219ENST00000534049 SLIT1O75093 1534 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 STRCP1A6NGW2 1772 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 CCP110O43303 1012 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 C1QL1O75973 258 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 ATXN1LP0C7T5 689 aaKnown RBP4.87□□□□□ -1.63
ITGB1-219ENST00000534049 GCLCP48506 637 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-219ENST00000534049 AMOTQ4VCS5 1084 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 RBM20Q5T481 1227 aaKnown RBP4.87□□□□□ -1.63
ITGB1-219ENST00000534049 WDR78Q5VTH9 848 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 ZKSCAN2Q63HK3 967 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 TAF2Q6P1X5 1199 aa4.87□□□□□ -1.63
ITGB1-219ENST00000534049 SLC30A10Q6XR72 485 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms