RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 GREB1Q4ZG55 1949 aa17.23■□□□□ 0.35
RELA-216ENST00000531238 ZDBF2Q9HCK1 2354 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 C2orf78A6NCI8 922 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 HHLA1C9JL84 531 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 RNF225M0QZC1 329 aaPredicted RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 ARNTLO00327 626 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 P4HA2O15460 535 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 FGFR1OPO95684 399 aaKnown RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 AFPP02771 609 aaKnown RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 CCDC192P0DO97 292 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 PSMC3P17980 439 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 ACO1P21399 889 aaKnown RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 ANXA13P27216 316 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 ERCC5P28715 1186 aaPredicted RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 AVPR2P30518 371 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 GDI1P31150 447 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 PGFP49763 221 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 MAP3K7CLP57077 242 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 TAF10Q12962 218 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 CREBRFQ8IUR6 639 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 ARHGEF19Q8IW93 802 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 TMEM105Q8N8V8 129 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 TMEM176AQ96HP8 235 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 HEXIM2Q96MH2 286 aaKnown RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 GCNAQ96QF7 691 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 KRT82Q9NSB4 513 aa17.22■□□□□ 0.35
RELA-216ENST00000531238 UXTQ9UBK9 157 aaPredicted RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 CHORDC1Q9UHD1 332 aaPredicted RBP17.22■□□□□ 0.35
RELA-216ENST00000531238 ZNF840PA6NDX5 716 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 ZXDBP98169 803 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 FCHO2Q0JRZ9 810 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 CLEC20AQ6ZU45 233 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 RRAGAQ7L523 313 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 GPRIN1Q7Z2K8 1008 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 ARL14EPQ8N8R7 260 aaPredicted RBP17.21■□□□□ 0.35
RELA-216ENST00000531238 FLCNQ8NFG4 579 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 MRPS31Q92665 395 aaKnown RBP17.21■□□□□ 0.35
RELA-216ENST00000531238 SMARCD1Q96GM5 515 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 ZFYVE19Q96K21 471 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 RNF38Q9H0F5 515 aa17.21■□□□□ 0.35
RELA-216ENST00000531238 DMAP1Q9NPF5 467 aaPredicted RBP17.21■□□□□ 0.35
RELA-216ENST00000531238 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
RELA-216ENST00000531238 FAM92AA1XBS5 289 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 SOBPA7XYQ1 873 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 CALCAP01258 141 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 CD72P21854 359 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.34
RELA-216ENST00000531238 SLC5A3P53794 718 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 STARD6P59095 220 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 APBA1Q02410 837 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 IFRD2Q12894 506 aaPredicted RBP17.2■□□□□ 0.34
RELA-216ENST00000531238 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 DEPDC1BQ8WUY9 529 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 KREMEN1Q96MU8 473 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 THAP9Q9H5L6 903 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 BRD9Q9H8M2 597 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 TRPC7Q9HCX4 862 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 ARHGEF3Q9NR81 526 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 HEBP1Q9NRV9 189 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 TMEM63CQ9P1W3 806 aa17.2■□□□□ 0.34
RELA-216ENST00000531238 MTF2Q9Y483 593 aaPredicted RBP17.2■□□□□ 0.34
RELA-216ENST00000531238 DENND4CQ5VZ89 1909 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 ZNF263O14978 683 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 FAM200BP0CF97 657 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 SLC9A1P19634 815 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 YWHAQP27348 245 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 CLCN5P51795 746 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 ARHGAP17Q68EM7 881 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 ASTLQ6HA08 431 aaPredicted RBP17.19■□□□□ 0.34
RELA-216ENST00000531238 SUGP1Q8IWZ8 645 aaKnown RBP17.19■□□□□ 0.34
RELA-216ENST00000531238 CELF5Q8N6W0 485 aaKnown RBP17.19■□□□□ 0.34
RELA-216ENST00000531238 NT5C1BQ96P26 610 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 ZSWIM1Q9BR11 485 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 CRACR2AQ9BSW2 395 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 DDX23Q9BUQ8 820 aaKnown RBP17.19■□□□□ 0.34
RELA-216ENST00000531238 DUSP16Q9BY84 665 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 FOXQ1Q9C009 403 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 INTS2Q9H0H0 1204 aaKnown RBP17.19■□□□□ 0.34
RELA-216ENST00000531238 MFSD1Q9H3U5 465 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 TBC1D17Q9HA65 648 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 TDP1Q9NUW8 608 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 OBP2AQ9NY56 170 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 TRPM5Q9NZQ8 1165 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 ZNF318Q5VUA4 2279 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 ATP8B3O60423 1300 aa17.19■□□□□ 0.34
RELA-216ENST00000531238 CHADO15335 359 aa17.18■□□□□ 0.34
RELA-216ENST00000531238 RTN3O95197 1032 aaPredicted RBP17.18■□□□□ 0.34
RELA-216ENST00000531238 ZDHHC11BP0C7U3 371 aa17.18■□□□□ 0.34
RELA-216ENST00000531238 HDCP19113 662 aa17.18■□□□□ 0.34
RELA-216ENST00000531238 AVPR1AP37288 418 aa17.18■□□□□ 0.34
RELA-216ENST00000531238 PFKPQ01813 784 aa17.18■□□□□ 0.34
RELA-216ENST00000531238 MLF2Q15773 248 aaPredicted RBP17.18■□□□□ 0.34
RELA-216ENST00000531238 CT47A1Q5JQC4 288 aaPredicted RBP17.18■□□□□ 0.34
RELA-216ENST00000531238 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
RELA-216ENST00000531238 DPY19L2P1Q6NXN4 242 aa17.18■□□□□ 0.34
RELA-216ENST00000531238 GJB7Q6PEY0 223 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms