RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SLC9A5Q14940 896 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 TCTN1Q2MV58 587 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 MFSD5Q6N075 450 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 GPBP1Q86WP2 473 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 EXOC8Q8IYI6 725 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 NME8Q8N427 588 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 METTL13Q8N6R0 699 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 RASSF8Q8NHQ8 419 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 PRPF31Q8WWY3 499 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 DNAJC19Q96DA6 116 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 SCLYQ96I15 445 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 CCDC43Q96MW1 224 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 POLR3FQ9H1D9 316 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 TNMDQ9H2S6 317 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 CUEDC2Q9H467 287 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 KCND2Q9NZV8 630 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 SUCLA2Q9P2R7 463 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 COL4A3BPQ9Y5P4 624 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 TRPV2Q9Y5S1 764 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 CDY2AQ9Y6F7 541 aa9.64□□□□□ -0.87
CCDC90B-217ENST00000530253 ADGRA3Q8IWK6 1321 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 NPHP3-ACAD11A0A0J9YXS1 232 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 RSPH10B2B2RC85 870 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 HIP1RO75146 1068 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 SSBP05455 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 RSPH10BP0C881 870 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 GLI4P10075 376 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 TMOD1P28289 359 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 ZNF131P52739 623 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 EPHB4P54760 987 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 LAMTOR4Q0VGL1 99 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 GIT2Q14161 759 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 LPIN1Q14693 890 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 KIZQ2M2Z5 673 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 LONRF3Q496Y0 759 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 FBXO47Q5MNV8 452 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 CNNM4Q6P4Q7 775 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 RSPH3Q86UC2 560 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 CARFQ8N187 725 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 IQUBQ8NA54 791 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 PSPC1Q8WXF1 523 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 BADQ92934 168 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 PEX11GQ96HA9 241 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 ZNF668Q96K58 619 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 FIZ1Q96SL8 496 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 MAP7D2Q96T17 732 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 REEP2Q9BRK0 252 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 TIPINQ9BVW5 301 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 CELF4Q9BZC1 486 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 NOL6Q9H6R4 1146 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 MAGEF1Q9HAY2 307 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 POLD4Q9HCU8 107 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 LMBRD1Q9NUN5 540 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 NTMQ9P121 344 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 AKT3Q9Y243 479 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 EYSQ5T1H1 3165 aa9.63□□□□□ -0.87
CCDC90B-217ENST00000530253 SCN5AQ14524 2016 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 A0A087WZ62 844 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 FRMD3A2A2Y4 597 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 GHRP10912 638 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 DARSP14868 501 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 CSF2RAP15509 400 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 RFC2P35250 354 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 SYKP43405 635 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 CRYBB1P53674 252 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 NLRP11P59045 1033 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 UBE2HP62256 183 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 POU5F1BQ06416 359 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 PUM1Q14671 1186 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 C9orf50Q5SZB4 431 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 FAM102BQ5T8I3 360 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 KRBA2Q6ZNG9 492 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 C16orf59Q7L2K0 433 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 MAEAQ7L5Y9 396 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 ZNF410Q86VK4 478 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 FAM228AQ86W67 206 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 RHPN2Q8IUC4 686 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 GRAMD1CQ8IYS0 662 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 ADGRG2Q8IZP9 1017 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 NETO2Q8NC67 525 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 RBBP8NLQ8NC74 664 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 GIPC2Q8TF65 315 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 TCP11Q8WWU5 503 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 CPA5Q8WXQ8 436 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 STAMQ92783 540 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 KIFAP3Q92845 792 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 GBP4Q96PP9 640 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 LBHD1Q9BQE6 289 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 FDXACB1Q9BRP7 624 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 PYM1Q9BRP8 204 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 TRIM9Q9C026 710 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 MINDY3Q9H8M7 445 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 AGO3Q9H9G7 860 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 IFT122Q9HBG6 1241 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 ODF2LQ9ULJ1 636 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 NOC2LQ9Y3T9 749 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 SQORQ9Y6N5 450 aa9.62□□□□□ -0.87
CCDC90B-217ENST00000530253 KAT6AQ92794 2004 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms