RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 TTLL2Q9BWV7 592 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 DMAP1Q9NPF5 467 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 KRT82Q9NSB4 513 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 ZMYM5Q9UJ78 669 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 NFE2L3Q9Y4A8 694 aa17.2■□□□□ 0.34
SSSCA1-202ENST00000526433 ANAPC1Q9H1A4 1944 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 OBSL1O75147 1896 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 SOBPA7XYQ1 873 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 PRR33A8MZF0 331 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 TADA3O75528 432 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 CFHP08603 1231 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 FAM200BP0CF97 657 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 DDX6P26196 483 aaKnown RBP eCLIP17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 WEE1P30291 646 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 MAP3K7CLP57077 242 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 PHLDB3Q6NSJ2 640 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 GBP6Q6ZN66 633 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 C11orf57Q6ZUT1 292 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 BMP8AQ7Z5Y6 402 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 ARHGEF19Q8IW93 802 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 KAT5Q92993 513 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 PBXIP1Q96AQ6 731 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 E2F7Q96AV8 911 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 RSPRY1Q96DX4 576 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 TUBGCP2Q9BSJ2 902 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 CSNK1G1Q9HCP0 422 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 SLC2A4RGQ9NR83 387 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 TRPM5Q9NZQ8 1165 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 WNT16Q9UBV4 365 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 FBXL21Q9UKT6 434 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 PCDHB4Q9Y5E5 795 aa17.19■□□□□ 0.34
SSSCA1-202ENST00000526433 HEPACAM2A8MVW5 462 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 KCNJ18B7U540 433 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 TNFRSF10BO14763 440 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 RTN3O95197 1032 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 SLC9A1P19634 815 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 ACO1P21399 889 aaKnown RBP17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 YWHAQP27348 245 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 IFRD2Q12894 506 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 TAF10Q12962 218 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 KCNJ12Q14500 433 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 VWA3BQ502W6 1294 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 VITQ6UXI7 678 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 HFE2Q6ZVN8 426 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 MFSD6LQ8IWD5 586 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 CMTM8Q8IZV2 173 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 SCAMP5Q8TAC9 235 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 DUSP16Q9BY84 665 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 UBE2TQ9NPD8 197 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 IL37Q9NZH6 218 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 GCNT4Q9P109 453 aa17.18■□□□□ 0.34
SSSCA1-202ENST00000526433 GTPBP10A4D1E9 387 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 DPYSL4O14531 572 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 PDGFBP01127 241 aaPredicted RBP17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 PSMC3P17980 439 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 PPP3CCP48454 512 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 GCNT1Q02742 428 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 TYRO3Q06418 890 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 GRM2Q14416 872 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 EXOC3L4Q17RC7 722 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 TCP11X2Q5H9J9 407 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 ARHGAP17Q68EM7 881 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 TMEM270Q6UE05 265 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 CLEC20AQ6ZU45 233 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 KREMEN1Q96MU8 473 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 LRRC3BQ96PB8 259 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 CYP2S1Q96SQ9 504 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 TRMT61BQ9BVS5 477 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 SMG9Q9H0W8 520 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 NDST4Q9H3R1 872 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 TRPC7Q9HCX4 862 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 FANCLQ9NW38 375 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 COMMD8Q9NX08 183 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 CHORDC1Q9UHD1 332 aaPredicted RBP17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 KIAA1257Q9ULG3 409 aa17.17■□□□□ 0.34
SSSCA1-202ENST00000526433 NUP210Q8TEM1 1887 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 ZNF840PA6NDX5 716 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 RNF225M0QZC1 329 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 PRAMEF12O95522 483 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 ABL1P00519 1130 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 VDRP11473 427 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 CD19P15391 556 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 NPR3P17342 541 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 PTMSP20962 102 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 EEF1GP26641 437 aaKnown RBP17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 GDI1P31150 447 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 AVPR1AP37288 418 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 SLC5A3P53794 718 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 KLHL40Q2TBA0 621 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 MIIPQ5JXC2 388 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 TRIM65Q6PJ69 517 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 DEPDC1BQ8WUY9 529 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 FBXO32Q969P5 355 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 SLITRK1Q96PX8 696 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 BRD9Q9H8M2 597 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 OBP2AQ9NY56 170 aa17.16■□□□□ 0.34
SSSCA1-202ENST00000526433 CA14Q9ULX7 337 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms