RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 GRM1Q13255 1194 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 CSRP2Q16527 193 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 LY6G5CQ5SRR4 150 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 ARL6IP4Q66PJ3 421 aaKnown RBP5.3□□□□□ -1.56
CSDE1-211ENST00000525970 FBXO38Q6PIJ6 1188 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 USP17L6PQ6QN14 398 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 PPP1R32Q7Z5V6 425 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 LRRTM4Q86VH4 590 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 HERC6Q8IVU3 1022 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 SLC15A4Q8N697 577 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 NLGN4YQ8NFZ3 816 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-211ENST00000525970 IPCEF1Q8WWN9 437 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-211ENST00000525970 HERVK_113Q902F9 699 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 DDX17Q92841 729 aaKnown RBP5.3□□□□□ -1.56
CSDE1-211ENST00000525970 SCAMP4Q969E2 229 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 SPSB4Q96A44 273 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 LRRC46Q96FV0 321 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 SNX27Q96L92 541 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 DCLRE1CQ96SD1 692 aaKnown RBP5.3□□□□□ -1.56
CSDE1-211ENST00000525970 SPATA5L1Q9BVQ7 753 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 INO80BQ9C086 356 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-211ENST00000525970 DHX36Q9H2U1 1008 aaKnown RBP5.3□□□□□ -1.56
CSDE1-211ENST00000525970 UNC45AQ9H3U1 944 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 WASH6PQ9NQA3 447 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 TRPM5Q9NZQ8 1165 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 NRBP1Q9UHY1 535 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 MID2Q9UJV3 735 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 ITGB1BP2Q9UKP3 347 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 PACSIN3Q9UKS6 424 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 TNFRSF18Q9Y5U5 241 aa5.3□□□□□ -1.56
CSDE1-211ENST00000525970 DRGXA6NNA5 263 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 PIP5K1BO14986 540 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 POMCP01189 267 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 LMNAP02545 664 aaKnown RBP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 ITGB1P05556 798 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 PIM1P11309 404 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 CKBP12277 381 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 PTTG1IPP53801 180 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 WNT3P56703 355 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 RNASE9P60153 205 aaKnown RBP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 G3BP1Q13283 466 aaKnown RBP eCLIP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 NPY5RQ15761 445 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 MAPKAPK3Q16644 382 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 FAM110CQ1W6H9 321 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 ARHGAP15Q53QZ3 475 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 ZNF529Q6P280 563 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 ZDHHC24Q6UX98 284 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 USP49Q70CQ1 688 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 MED25Q71SY5 747 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 USP37Q86T82 979 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 KRT73Q86Y46 540 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 CPOQ8IVL8 374 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 YAF2Q8IY57 180 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 OR1N1Q8NGS0 311 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 DDX23Q9BUQ8 820 aaKnown RBP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 STK31Q9BXU1 1019 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 TINAGL1Q9GZM7 467 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 XPNPEP3Q9NQH7 507 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 TBC1D23Q9NUY8 699 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 XPR1Q9UBH6 696 aa5.29□□□□□ -1.56
CSDE1-211ENST00000525970 LAS1LQ9Y4W2 734 aaKnown RBP5.29□□□□□ -1.56
CSDE1-211ENST00000525970 PRSS47A8MTI9 375 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 GRXCR1A8MXD5 290 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 E9PLN8 166 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 KIAA0391O15091 583 aaKnown RBP5.28□□□□□ -1.56
CSDE1-211ENST00000525970 TRIM24O15164 1050 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 ASNA1O43681 348 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 SNX2O60749 519 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 HAUS5O94927 633 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 CD4P01730 458 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 GNAI2P04899 355 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 CAPN3P20807 821 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 ACVR2AP27037 513 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 CST5P28325 142 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-211ENST00000525970 CHN2P52757 468 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 PSMC1P62191 440 aaKnown RBP5.28□□□□□ -1.56
CSDE1-211ENST00000525970 MXRA7P84157 204 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 UBXN2BQ14CS0 331 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 PTPAQ15257 358 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 TAF12Q16514 161 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 TRIM71Q2Q1W2 868 aaKnown RBP5.28□□□□□ -1.56
CSDE1-211ENST00000525970 TMTC4Q5T4D3 741 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 FCRL6Q6DN72 434 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 SULT6B1Q6IMI4 303 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 LRRC55Q6ZSA7 311 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 RSRC2Q7L4I2 434 aaKnown RBP5.28□□□□□ -1.56
CSDE1-211ENST00000525970 UBE3BQ7Z3V4 1068 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 GDF7Q7Z4P5 450 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 GAS2L3Q86XJ1 694 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 PRIMA1Q86XR5 153 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 SYT12Q8IV01 421 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 TMIEQ8NEW7 156 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 VKORC1Q9BQB6 163 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 FAM167BQ9BTA0 163 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 CNPPD1Q9BV87 410 aa5.28□□□□□ -1.56
CSDE1-211ENST00000525970 OSBPL5Q9H0X9 879 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-211ENST00000525970 TMX4Q9H1E5 349 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms