RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 PRR5-ARHGAP8B1AHC4 643 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 CTNND1O60716 968 aaKnown RBP8.25□□□□□ -1.09
SDCBP-208ENST00000520228 IL12RB1P42701 662 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 MAGEA10P43363 369 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-208ENST00000520228 MMP14P50281 582 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 TFCP2Q12800 502 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 OS9Q13438 667 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-208ENST00000520228 GBX1Q14549 363 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 LCE4AQ5TA78 99 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 CEP85Q6P2H3 762 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 ZNF585AQ6P3V2 769 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 OVCH2Q7RTZ1 564 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 PPP1R35Q8TAP8 253 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 SSH3Q8TE77 659 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 FAM193BQ96PV7 902 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-208ENST00000520228 ADOQ96SZ5 270 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 MNTQ99583 582 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 C1QTNF3Q9BXJ4 246 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 KLC2Q9H0B6 622 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 DEF6Q9H4E7 631 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 MYOZ2Q9NPC6 264 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 C1orf112Q9NSG2 853 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 ZBTB40Q9NUA8 1239 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 PGAP2Q9UHJ9 254 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 TCAF1Q9Y4C2 921 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 LTBP1Q14766 1721 aa8.25□□□□□ -1.09
SDCBP-208ENST00000520228 SURF6O75683 361 aaKnown RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 TUSC2O75896 110 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 UBXN7O94888 489 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 ARIH2O95376 493 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 SBK3P0C264 359 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 HK1P19367 917 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 SCNN1GP51170 649 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 TIMM10P62072 90 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 FKBP1AP62942 108 aaKnown RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 NKX6-1P78426 367 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 CHAF1AQ13111 956 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 GADL1Q6ZQY3 521 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 SYT12Q8IV01 421 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 GSPT2Q8IYD1 628 aaKnown RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 CERS5Q8N5B7 392 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 CHST13Q8NET6 341 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 IL17RDQ8NFM7 739 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 ZFP28Q8NHY6 868 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 TFAP2CQ92754 450 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 DCPSQ96C86 337 aaKnown RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 GNL3LQ9NVN8 582 aaKnown RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 DDX20Q9UHI6 824 aaKnown RBP8.24□□□□□ -1.09
SDCBP-208ENST00000520228 PCDHA3Q9Y5H8 950 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 NR2E3Q9Y5X4 410 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 FAM205AQ6ZU69 1335 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 PASKQ96RG2 1323 aa8.24□□□□□ -1.09
SDCBP-208ENST00000520228 ZNF609O15014 1411 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 A0A1B0GUL7 405 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 B3GALT2O43825 422 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 AMHP03971 560 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 SLC6A4P31645 630 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 RRP1P56182 461 aaKnown RBP8.23□□□□□ -1.09
SDCBP-208ENST00000520228 UBXN2BQ14CS0 331 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 CDSNQ15517 529 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 PABPC1LQ4VXU2 614 aaKnown RBP8.23□□□□□ -1.09
SDCBP-208ENST00000520228 ARHGAP29Q52LW3 1261 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 ATXN7L2Q5T6C5 722 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-208ENST00000520228 METRNLQ641Q3 311 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 EFCAB12Q6NXP0 572 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 ZNF529Q6P280 563 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 HEATR3Q7Z4Q2 680 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 RPAP2Q8IXW5 612 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-208ENST00000520228 CAMKK1Q8N5S9 505 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 RNF169Q8NCN4 708 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 TBC1D22AQ8WUA7 517 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 NEUROD6Q96NK8 337 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 GLIS2Q9BZE0 524 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-208ENST00000520228 MAN1C1Q9NR34 630 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 FBXO34Q9NWN3 711 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 GEMIN8Q9NWZ8 242 aaKnown RBP8.23□□□□□ -1.09
SDCBP-208ENST00000520228 STXBP5LQ9Y2K9 1186 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 TESMINQ9Y4I5 508 aa8.23□□□□□ -1.09
SDCBP-208ENST00000520228 A6NNZ2 444 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 KRTAP9-7A8MTY7 169 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 F2RL2O00254 374 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 GRM6O15303 877 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 HMMRO75330 724 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 CD1AP06126 327 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 FTH1P19P0C7X4 201 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 TYRP14679 529 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 ADORA1P30542 326 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 MAN2A2P49641 1150 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 RAP2BP61225 183 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 GRM3Q14832 879 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 DLGAP5Q15398 846 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 GORABQ5T7V8 394 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 OR10H5Q8NGA6 315 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 DVL3Q92997 716 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-208ENST00000520228 CDK5RAP3Q96JB5 506 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 FAM167AQ96KS9 214 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 GPR87Q9BY21 358 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 KRTAP9-9Q9BYP9 154 aa8.22□□□□□ -1.09
SDCBP-208ENST00000520228 KRTAP9-4Q9BYQ2 154 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms