RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CAMKK1Q8N5S9 505 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 BEND2Q8NDZ0 799 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 ZFP28Q8NHY6 868 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 TFAP2CQ92754 450 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 COQ10AQ96MF6 247 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 CGRRF1Q99675 332 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 C11orf54Q9H0W9 315 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 SERHL2Q9H4I8 314 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 AKIP1Q9NQ31 210 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 MAN1C1Q9NR34 630 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 ADARB2Q9NS39 739 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 GABBR1Q9UBS5 961 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 RUVBL1Q9Y265 456 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 TNFRSF18Q9Y5U5 241 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 NRXN2Q9P2S2 1712 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 ZNF609O15014 1411 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 MAP3K19Q56UN5 1328 aa4.45□□□□□ -1.7
TOPBP1-208ENST00000511439 MRC1P22897 1456 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 CD163L1Q9NR16 1453 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 MON2Q7Z3U7 1717 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 KDRP35968 1356 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 NT5C1B-RDH14C9J2C7 533 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 ARIH2O95376 493 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 SBK3P0C264 359 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 CREMQ03060 361 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 UBXN2BQ14CS0 331 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 ATP2B3Q16720 1220 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 SLC9C1Q4G0N8 1177 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 ARHGAP29Q52LW3 1261 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 ATXN7L2Q5T6C5 722 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 ARMC6Q6NXE6 501 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 EFCAB12Q6NXP0 572 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 OVCH2Q7RTZ1 564 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 RASAL3Q86YV0 1011 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 TDHQ8IZJ6 230 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 ZBTB34Q8NCN2 500 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 PPP1R35Q8TAP8 253 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 PIGBQ92521 554 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 CDK5RAP3Q96JB5 506 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 LRFN3Q9BTN0 628 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 ZNF768Q9H5H4 540 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 C1orf112Q9NSG2 853 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 OBP2AQ9NY56 170 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 SRP68Q9UHB9 627 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 PCDHA3Q9Y5H8 950 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 CACNA1GO43497 2377 aa4.44□□□□□ -1.7
TOPBP1-208ENST00000511439 CARMIL3Q8ND23 1372 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 TCRBV7S2A1N4TA0A589 114 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 F2RL2O00254 374 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 GRM6O15303 877 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 TUSC2O75896 110 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 UBXN7O94888 489 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 POMCP01189 267 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 CD1AP06126 327 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 FTH1P19P0C7X4 201 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 LMO1P25800 156 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 ZFP36P26651 326 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 RAP2BP61225 183 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 NKX6-1P78426 367 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 GUCY1B3Q02153 619 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 GBX1Q14549 363 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 PABPC1LQ4VXU2 614 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 ZNF529Q6P280 563 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 SLC4A10Q6U841 1118 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 UBE3BQ7Z3V4 1068 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 HEATR3Q7Z4Q2 680 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 SYT12Q8IV01 421 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 RNF169Q8NCN4 708 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 IL17RDQ8NFM7 739 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 KLHDC4Q8TBB5 520 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 NELL1Q92832 810 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 ERO1AQ96HE7 468 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 FAM167AQ96KS9 214 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 WDR11Q9BZH6 1224 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 FBXO34Q9NWN3 711 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 SIDT1Q9NXL6 827 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 TMOD3Q9NYL9 352 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 ABCF2Q9UG63 623 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 DDX20Q9UHI6 824 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 PGAP2Q9UHJ9 254 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 CHST2Q9Y4C5 530 aa4.43□□□□□ -1.7
TOPBP1-208ENST00000511439 LTN1O94822 1766 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 ZNF831Q5JPB2 1677 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 A0A088AWK7 358 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 DRGXA6NNA5 263 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 MASP2O00187 686 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 KIAA0391O15091 583 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 NCR1O76036 304 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 SERPINB2P05120 415 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 HKR1P10072 659 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 MYBP10242 640 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 MTHFD1P11586 935 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 ALAS1P13196 640 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 COL11A2P13942 1736 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 TYRP14679 529 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 COL5A3P25940 1745 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 HTR1BP28222 390 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 SMARCA1P28370 1054 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 PRDX5P30044 214 aa4.42□□□□□ -1.7
TOPBP1-208ENST00000511439 SLC6A4P31645 630 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms