RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SLC8B1Q6J4K2 584 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ARMC6Q6NXE6 501 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 USP53Q70EK8 1073 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF605Q86T29 641 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF598Q86UK7 904 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 TSC1Q92574 1164 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 DDX12PQ92771 950 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 N4BP2L2Q92802 583 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 LPPQ93052 612 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TMA16Q96EY4 203 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 HPDLQ96IR7 371 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PGBD1Q96JS3 809 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 NT5C1BQ96P26 610 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ALS2CR12Q96Q35 445 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SRPK1Q96SB4 655 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 NT5C1AQ9BXI3 368 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SLC7A5P2Q9GIP4 190 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 NAT10Q9H0A0 1025 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 TRIT1Q9H3H1 467 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 FZD8Q9H461 694 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 CWH43Q9H720 699 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TRPV4Q9HBA0 871 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZSWIM6Q9HCJ5 1215 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PANK4Q9NVE7 773 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 DNAJC17Q9NVM6 304 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 DDX43Q9NXZ2 648 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 COL20A1Q9P218 1284 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 HBS1LQ9Y450 684 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 NFE2L3Q9Y4A8 694 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PCDHGB2Q9Y5G2 931 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 SMIM28A0A1B0GU29 152 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 VWA3AA6NCI4 1184 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GOLGA8CPA6NN73 597 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 C3orf80F5H4A9 247 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 CUTAO60888 179 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 IGHA2P01877 340 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 DCNP07585 359 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 ADRB1P08588 477 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ALPIP09923 528 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF883P0CG24 379 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ITGAXP20702 1163 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 HOXC13P31276 330 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ARL2P36404 184 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PPARGP37231 505 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 SUOXP51687 545 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 NPEPPSP55786 919 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SLC20A2Q08357 652 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF177Q13360 481 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 MCM6Q14566 821 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 NECTIN1Q15223 517 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PLA2G4FQ68DD2 849 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 WDR49Q8IV35 697 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ELOA2Q8IYF1 753 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 SDR16C5Q8N3Y7 309 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 RYBPQ8N488 228 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 CSGALNACT2Q8N6G5 542 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 HMGB4Q8WW32 186 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 CLDN23Q96B33 292 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PLD4Q96BZ4 506 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 FEM1CQ96JP0 617 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TARS2Q9BW92 718 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 GZF1Q9H116 711 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 ARRDC1-AS1Q9H2J1 176 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 RETREG1Q9H6L5 497 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF334Q9HCZ1 680 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 SPASTQ9UBP0 616 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 MMP17Q9ULZ9 603 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ARHGAP26Q9UNA1 814 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PCDHGA1Q9Y5H4 931 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PIEZO1Q92508 2521 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PVALEFA0A1B0GWK0 134 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GOLGA6CA6NDK9 693 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GOLGA6BA6NDN3 693 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 DHX15O43143 795 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 ATP9AO75110 1047 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GPR32O75388 356 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 HEXIM1O94992 359 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 PRNPP04156 253 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GOLGA6DP0CG33 693 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 HLA-EP13747 358 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 LRPAP1P30533 357 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PSMC2P35998 433 aaKnown RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 ZNF135P52742 658 aaPredicted RBP3□□□□□ -1.93
CLOCK-209ENST00000511124 ADAM17P78536 824 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 SPAG1Q07617 926 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 DUSP4Q13115 394 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TEAD2Q15562 447 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ACCSLQ4AC99 568 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 ANO7Q6IWH7 933 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 JAMLQ86YT9 394 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 HPS6Q86YV9 775 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 CREBRFQ8IUR6 639 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 NPAS3Q8IXF0 933 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 CMTM8Q8IZV2 173 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 RAB42Q8N4Z0 105 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 GSDMBQ8TAX9 411 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 KIAA1524Q8TCG1 905 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 TM9SF4Q92544 642 aa3□□□□□ -1.93
CLOCK-209ENST00000511124 PSMG2Q969U7 264 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms