RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 TSPAN3O60637 253 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 GFPT2O94808 682 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 HEXIM1O94992 359 aaKnown RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 TKTL1P51854 596 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 OXCT1P55809 520 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 C21orf59P57076 290 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 SPIRE1Q08AE8 756 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 ANKRD54Q6NXT1 300 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 FBF1Q8TES7 1133 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 NXPE3Q969Y0 559 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 GTPBP2Q9BX10 602 aaKnown RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 MRPL47Q9HD33 250 aaKnown RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 TRPM7Q96QT4 1865 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 WASP42768 502 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 PSEN1P49768 467 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 NDST1P52848 882 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 STK4Q13043 487 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 LPAL2Q16609 132 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 GSTA5Q7RTV2 222 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 PHLDB2Q86SQ0 1253 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 TOP6BLQ8N6T0 577 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 ANKRD63C9JTQ0 380 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 OAS2P29728 719 aaKnown RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 CCDC38Q502W7 563 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 PPP6R3Q5H9R7 873 aaPredicted RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 FAM26DQ5JW98 314 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 NT5DC1Q5TFE4 455 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 N4BP2L2Q92802 583 aaPredicted RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 SNX27Q96L92 541 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 ASB2Q96Q27 587 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 HERC2P3Q9BVR0 1158 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 SP110Q9HB58 689 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
LIN54-210ENST00000510877 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
LIN54-210ENST00000510877 CREB3O43889 395 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 SEC13P55735 322 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 ERVFC1P60507 584 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 CYP4F8P98187 520 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 KDSRQ06136 332 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 EDRF1Q3B7T1 1238 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 TTC30BQ8N4P2 665 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.08□□□□□ -0.32
LIN54-210ENST00000510877 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 VCXQ9H320 206 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 TLR5O60602 858 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 GPR32O75388 356 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 DNTTP04053 509 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 VDRP11473 427 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 PSMC3P17980 439 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 CA4P22748 312 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 EEF1GP26641 437 aaKnown RBP13.08□□□□□ -0.32
LIN54-210ENST00000510877 SLC8A1P32418 973 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 ZKSCAN8Q15776 578 aaPredicted RBP13.08□□□□□ -0.32
LIN54-210ENST00000510877 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 EPAS1Q99814 870 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.08□□□□□ -0.32
LIN54-210ENST00000510877 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 FBXO21O94952 628 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 PRCPP42785 496 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 LILRA4P59901 499 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 POLD3Q15054 466 aaPredicted RBP13.08□□□□□ -0.32
LIN54-210ENST00000510877 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 WHAMMP3Q1A5X7 153 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 SLC35G1Q2M3R5 365 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 GPR62Q9BZJ7 368 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 INTS2Q9H0H0 1204 aaKnown RBP13.08□□□□□ -0.32
LIN54-210ENST00000510877 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
LIN54-210ENST00000510877 SBF1O95248 1867 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
LIN54-210ENST00000510877 ASMTLO95671 621 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 GTF2BQ00403 316 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 CSTF1Q05048 431 aaKnown RBP13.07□□□□□ -0.32
LIN54-210ENST00000510877 MCL1Q07820 350 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 TEAD4Q15561 434 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 FRMD5Q7Z6J6 570 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 ATP2A3Q93084 1043 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 C18orf8Q96DM3 657 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SUSD3Q96L08 255 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 ABCG4Q9H172 646 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 PIAS3Q9Y6X2 628 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SULT1E1P49888 294 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 TAF10Q12962 218 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 TEAD2Q15562 447 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms