RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 LGALS13Q9UHV8 139 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 ANAPC5Q9UJX4 755 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 IPPQ9Y573 584 aa16.89■□□□□ 0.29
SQSTM1-213ENST00000510187 PTPRJQ12913 1337 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 LACTBL1A8MY62 500 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 GNA15P30679 374 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 SLCO1A2P46721 670 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 SCTRP47872 440 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 YARSP54577 528 aaKnown RBP16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 MAMLD1Q13495 774 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 WDR49Q8IV35 697 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 LRRC34Q8IZ02 419 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 UHMK1Q8TAS1 419 aaKnown RBP16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 ATG4AQ8WYN0 398 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 FAM84AQ96KN4 292 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 OSBPL8Q9BZF1 889 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 SLC40A1Q9NP59 571 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 FAM105AQ9NUU6 356 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 TMEM39AQ9NV64 488 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 PCDHB4Q9Y5E5 795 aa16.88■□□□□ 0.29
SQSTM1-213ENST00000510187 MGEA5O60502 916 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 NBNO60934 754 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 CLTBP09497 229 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 RALAP11233 206 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 AKAP5P24588 427 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 CHKAP35790 457 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ADCY8P40145 1251 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ZNF365Q70YC5 407 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 RBBP8NLQ8NC74 664 aaPredicted RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 SMG8Q8ND04 991 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ARHGEF2Q92974 986 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 PRMT1Q99873 361 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ADAM2Q99965 735 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 HERPUD2Q9BSE4 406 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ASB7Q9H672 318 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 APOBEC3GQ9HC16 384 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 PARVAQ9NVD7 372 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 IP6K2Q9UHH9 426 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 TBX21Q9UL17 535 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ACTL7BQ9Y614 415 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 NDC80O14777 642 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 THAP12O43422 761 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 RECQL4O94761 1208 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ACSL3O95573 720 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 LSM8O95777 96 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 CALCAP01258 141 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ABHD2P08910 425 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 CYP2C18P33260 490 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ZNF132P52740 706 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 CCL23P55773 120 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 NOP14P78316 857 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 TFAMQ00059 246 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 XRCC4Q13426 336 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 DSC3Q14574 896 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 LRRC38Q5VT99 294 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 DRICH1Q6PGQ1 229 aaPredicted RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 RIBC1Q8N443 379 aaPredicted RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 OR5B17Q8NGF7 314 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 ELMO3Q96BJ8 720 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 SCLYQ96I15 445 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 RBM41Q96IZ5 413 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 C11orf70Q9BRQ4 267 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 RNF39Q9H2S5 420 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 PLEKHA5Q9HAU0 1116 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 KLC4Q9NSK0 619 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 NINJ2Q9NZG7 142 aa16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 R3HDM2Q9Y2K5 976 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 MKI67P46013 3256 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-213ENST00000510187 NFICP08651 508 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 GTF2A1P52655 376 aaPredicted RBP16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 PPARDQ03181 441 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 STAT4Q14765 748 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 GPNMBQ14956 572 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 LONRF1Q17RB8 773 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 DUOXA2Q1HG44 320 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 JADE1Q6IE81 842 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 TMEM270Q6UE05 265 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 HACE1Q8IYU2 909 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 RCOR2Q8IZ40 523 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 UBR7Q8N806 425 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 FEZF2Q8TBJ5 459 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 SNX27Q96L92 541 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 CCDC77Q9BR77 488 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 MTMR12Q9C0I1 747 aa16.86■□□□□ 0.29
SQSTM1-213ENST00000510187 OAS1P00973 400 aaKnown RBP16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 CALB1P05937 261 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 VIMP08670 466 aaKnown RBP16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 TMEM191BP0C7N4 346 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 PTPN7P35236 360 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 RAB27AP51159 221 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 TAS2R40P59535 323 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 COPS2P61201 443 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 SPOPLQ6IQ16 392 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 VSTM1Q6UX27 236 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 ANKRD36BP1Q96IX9 119 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 PLCD4Q9BRC7 762 aa16.85■□□□□ 0.29
SQSTM1-213ENST00000510187 IMPG2Q9BZV3 1241 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms