RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NDFIP2Q9NV92 336 aa7.92□□□□□ -1.14
PDGFRA-206ENST00000508170 UCKL1Q9NWZ5 548 aa7.92□□□□□ -1.14
PDGFRA-206ENST00000508170 DDX43Q9NXZ2 648 aaKnown RBP7.92□□□□□ -1.14
PDGFRA-206ENST00000508170 MAN2B2Q9Y2E5 1009 aa7.92□□□□□ -1.14
PDGFRA-206ENST00000508170 SNX9Q9Y5X1 595 aa7.92□□□□□ -1.14
PDGFRA-206ENST00000508170 CLCA3PQ9Y6N3 262 aa7.92□□□□□ -1.14
PDGFRA-206ENST00000508170 IQGAP2Q13576 1575 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 CCDC78A2IDD5 438 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 IDH1O75874 414 aaKnown RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 CKMP06732 381 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 ACPPP15309 386 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 GALP22466 123 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 NF2P35240 595 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 MAGEA4P43358 317 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 CLCN4P51793 760 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 NNTQ13423 1086 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 ITGA7Q13683 1181 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PDK1Q15118 436 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PFKFB3Q16875 520 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PRSS53Q2L4Q9 553 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 MSS51Q4VC12 460 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 OGFOD3Q6PK18 319 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 KCNT2Q6UVM3 1135 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 EFCAB13Q8IY85 973 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 AOPEPQ8N6M6 819 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 MARCH10Q8NA82 808 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 IL31RAQ8NI17 732 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 ZNF671Q8TAW3 534 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 CCDC110Q8TBZ0 833 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 TMIGD2Q96BF3 282 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 DTNBP1Q96EV8 351 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 FER1L6-AS2Q96M78 137 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 ABHD1Q96SE0 405 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PUS3Q9BZE2 481 aaKnown RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 CARD9Q9H257 536 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 ST6GALNAC4Q9H4F1 302 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 TTC12Q9H892 705 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 POLE3Q9NRF9 147 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 SIRT3Q9NTG7 399 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 INTS13Q9NVM9 706 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 MTRF1LQ9UGC7 380 aaKnown RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 TMPRSS11EQ9UL52 423 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PCDHGA5Q9Y5G8 931 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PCDHA5Q9Y5H7 936 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 FPGT-TNNI3KV9GXZ4 949 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 A0A088AWK7 358 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 A0A1W2PQ09 198 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 XKRY2A2RUG3 117 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 FIGNL2A6NMB9 653 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PODXLO00592 558 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 TLL1O43897 1013 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 SUPT20HL2P0C7V6 817 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 LONP1P36776 959 aaKnown RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 GCLCP48506 637 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 RNF144AP50876 292 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PNLIPRP1P54315 467 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 GFRA1P56159 465 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PAK1Q13153 545 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 DBN1Q16643 649 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 SLC39A12Q504Y0 691 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 C6orf89Q6UWU4 347 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 MPRIPQ6WCQ1 1025 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 BBS12Q6ZW61 710 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 USP53Q70EK8 1073 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 CACNA2D4Q7Z3S7 1137 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 AGGF1Q8N302 714 aaeCLIP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 SFRP1Q8N474 314 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 FANCBQ8NB91 859 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 ZNF784Q8NCA9 323 aaPredicted RBP7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 KCNH5Q8NCM2 988 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 CNKSR1Q969H4 720 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 RMDN1Q96DB5 314 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 XAGE2Q96GT9 111 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 SUSD3Q96L08 255 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 APOL6Q9BWW8 343 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PCED1AQ9H1Q7 454 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 ZNF576Q9H609 170 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 IGSF1Q8N6C5 1336 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 TONSLQ96HA7 1378 aa7.91□□□□□ -1.14
PDGFRA-206ENST00000508170 PSMD9O00233 223 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 ZSCAN9O15535 394 aaPredicted RBP7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 BUB1O43683 1085 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 VEGFDO43915 354 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 ALBP02768 609 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 FGF4P08620 206 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 SELPP16109 830 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 ALDH4A1P30038 563 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 YWHAZP63104 245 aaKnown RBP7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 SQLEQ14534 574 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 IER5Q5VY09 327 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 RRAGBQ5VZM2 374 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 ATG16L1Q676U5 607 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 AAGABQ6PD74 315 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 CNTN4Q8IWV2 1026 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 RNF10Q8N5U6 811 aaKnown RBP7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 FAM160A2Q8N612 972 aaPredicted RBP7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 BANPQ8N9N5 519 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 OR1N1Q8NGS0 311 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms