RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 LMO3Q8TAP4 145 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 OVCA2Q8WZ82 227 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 ASIC4Q96FT7 647 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
SNCA-209ENST00000506244 KIF9Q9HAQ2 790 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 CSNK1G1Q9HCP0 422 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 C11orf16Q9NQ32 467 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 TRPM5Q9NZQ8 1165 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 WNT16Q9UBV4 365 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 TECTAO75443 2155 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 GREB1Q4ZG55 1949 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 KCNJ18B7U540 433 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 NARSO43776 548 aaKnown RBP17.67■□□□□ 0.42
SNCA-209ENST00000506244 TADA3O75528 432 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 NPR3P17342 541 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 PSMC3P17980 439 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 YWHAQP27348 245 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 SLC5A3P53794 718 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 RAD23BP54727 409 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 MYL5Q02045 173 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 KCNJ12Q14500 433 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 EXOC3L4Q17RC7 722 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 ARHGAP17Q68EM7 881 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 TANGO2Q6ICL3 276 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 TMEM150AQ86TG1 271 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 MON1AQ86VX9 555 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 ARID3BQ8IVW6 561 aaPredicted RBP17.67■□□□□ 0.42
SNCA-209ENST00000506244 YAF2Q8IY57 180 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 CMTM8Q8IZV2 173 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 SLC4A11Q8NBS3 891 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 ANKRD20A12PQ8NF67 263 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 TUBGCP2Q9BSJ2 902 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 TRMT61BQ9BVS5 477 aaKnown RBP17.67■□□□□ 0.42
SNCA-209ENST00000506244 MFSD1Q9H3U5 465 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 SMOC2Q9H3U7 446 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 FBXO44Q9H4M3 255 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 TMEM30AQ9NV96 361 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 KIAA1257Q9ULG3 409 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 NCANO14594 1321 aa17.67■□□□□ 0.42
SNCA-209ENST00000506244 DENND4CQ5VZ89 1909 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 PATJQ8NI35 1801 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 TRAV19A0A0A6YYK7 116 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 LETM1O95202 739 aaPredicted RBP17.66■□□□□ 0.42
SNCA-209ENST00000506244 CFHP08603 1231 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 PAEPP09466 180 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 MAP3K7CLP57077 242 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 USP46P62068 366 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 TYRO3Q06418 890 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 SGO2Q562F6 1265 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 TCP11X2Q5H9J9 407 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 SMYD5Q6GMV2 418 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 TRIM65Q6PJ69 517 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 TMEM270Q6UE05 265 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 VITQ6UXI7 678 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 CLEC20AQ6ZU45 233 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 MFSD6LQ8IWD5 586 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 SUGP1Q8IWZ8 645 aaKnown RBP17.66■□□□□ 0.42
SNCA-209ENST00000506244 CELF5Q8N6W0 485 aaKnown RBP17.66■□□□□ 0.42
SNCA-209ENST00000506244 UBR7Q8N806 425 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 MAB21L3Q8N8X9 362 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
SNCA-209ENST00000506244 DNASE1L2Q92874 299 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 FBXO32Q969P5 355 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 PBXIP1Q96AQ6 731 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 KCNK16Q96T55 309 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 SMOQ99835 787 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 LRFN3Q9BTN0 628 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 RPP25Q9BUL9 199 aaKnown RBP17.66■□□□□ 0.42
SNCA-209ENST00000506244 NDST4Q9H3R1 872 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 TRPC7Q9HCX4 862 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 PCDHB4Q9Y5E5 795 aa17.66■□□□□ 0.42
SNCA-209ENST00000506244 HEPACAM2A8MVW5 462 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 PES1O00541 588 aaKnown RBP17.65■□□□□ 0.42
SNCA-209ENST00000506244 CKMP06732 381 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 USP17L7P0C7H9 530 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 CD19P15391 556 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 RFX1P22670 979 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 BCAT1P54687 386 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 MFAP3P55082 362 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 IFRD2Q12894 506 aaPredicted RBP17.65■□□□□ 0.42
SNCA-209ENST00000506244 ZNF268Q14587 947 aaPredicted RBP17.65■□□□□ 0.42
SNCA-209ENST00000506244 STILQ15468 1287 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 VWA3BQ502W6 1294 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 PPP1R26Q5T8A7 1209 aaPredicted RBP17.65■□□□□ 0.42
SNCA-209ENST00000506244 TXNDC8Q6A555 127 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 POTEHQ6S545 545 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 C11orf57Q6ZUT1 292 aaPredicted RBP17.65■□□□□ 0.42
SNCA-209ENST00000506244 IRF7Q92985 503 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 SHDQ96IW2 340 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 SLC46A2Q9BY10 475 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 DUSP16Q9BY84 665 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 BRD9Q9H8M2 597 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 ARHGEF3Q9NR81 526 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 SAMSN1Q9NSI8 373 aaKnown RBP17.65■□□□□ 0.42
SNCA-209ENST00000506244 HESX1Q9UBX0 185 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 APEX2Q9UBZ4 518 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 MYH10P35580 1976 aa17.65■□□□□ 0.42
SNCA-209ENST00000506244 TNFRSF10BO14763 440 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms