RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 CRACR2AQ9BSW2 395 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 CSNK1G1Q9HCP0 422 aa18.92■□□□□ 0.62
SMN1-204ENST00000506163 HEPACAM2A8MVW5 462 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 HHLA1C9JL84 531 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 RNF225M0QZC1 329 aaPredicted RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 NPR3P17342 541 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 ANXA13P27216 316 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 ARHGAP15Q53QZ3 475 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 CT47A1Q5JQC4 288 aaPredicted RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 MON1AQ86VX9 555 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 RIN3Q8TB24 985 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 HEXIM2Q96MH2 286 aaKnown RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 KREMEN1Q96MU8 473 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 NT5C1BQ96P26 610 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 INTS2Q9H0H0 1204 aaKnown RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 IL37Q9NZH6 218 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 UXTQ9UBK9 157 aaPredicted RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 WNT16Q9UBV4 365 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 DACH1Q9UI36 760 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 CCL26Q9Y258 94 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 COL4A3Q01955 1670 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 C2orf78A6NCI8 922 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 CALCAP01258 141 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 SLC9A1P19634 815 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 WEE1P30291 646 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 PGFP49763 221 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 MAP3K7CLP57077 242 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 TAF10Q12962 218 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 TPD52L1Q16890 204 aaPredicted RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 MIIPQ5JXC2 388 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 CLEC20AQ6ZU45 233 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 GPRIN1Q7Z2K8 1008 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 CMTM8Q8IZV2 173 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 NUP93Q8N1F7 819 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 GCNAQ96QF7 691 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 DMAP1Q9NPF5 467 aaPredicted RBP18.91■□□□□ 0.62
SMN1-204ENST00000506163 GCNT4Q9P109 453 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 RAPGEFL1Q9UHV5 662 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 MYH10P35580 1976 aa18.91■□□□□ 0.62
SMN1-204ENST00000506163 ZNF318Q5VUA4 2279 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 ATP8B3O60423 1300 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 ZNF840PA6NDX5 716 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 MTIF2P46199 727 aaKnown RBP18.9■□□□□ 0.62
SMN1-204ENST00000506163 GJB7Q6PEY0 223 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 MFSD6LQ8IWD5 586 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 SIX5Q8N196 739 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 PPM1KQ8N3J5 372 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 MRPS31Q92665 395 aaKnown RBP18.9■□□□□ 0.62
SMN1-204ENST00000506163 USP13Q92995 863 aaPredicted RBP18.9■□□□□ 0.62
SMN1-204ENST00000506163 ZSWIM1Q9BR11 485 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 FAM124BQ9H5Z6 455 aaPredicted RBP18.9■□□□□ 0.62
SMN1-204ENST00000506163 CA14Q9ULX7 337 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 NFE2L3Q9Y4A8 694 aa18.9■□□□□ 0.62
SMN1-204ENST00000506163 SHISA7A6NL88 538 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 FAM200BP0CF97 657 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 PSMC3P17980 439 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 TBXAS1P24557 533 aaPredicted RBP18.89■□□□□ 0.61
SMN1-204ENST00000506163 SLC5A3P53794 718 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 CETN1Q12798 172 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 IFRD2Q12894 506 aaPredicted RBP18.89■□□□□ 0.61
SMN1-204ENST00000506163 ARHGAP17Q68EM7 881 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 DPY19L2P1Q6NXN4 242 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 CAVIN1Q6NZI2 390 aaKnown RBP18.89■□□□□ 0.61
SMN1-204ENST00000506163 SASS6Q6UVJ0 657 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 TTC39CQ8N584 583 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 TFAP2BQ92481 460 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 TRMT61BQ9BVS5 477 aaKnown RBP18.89■□□□□ 0.61
SMN1-204ENST00000506163 DUSP16Q9BY84 665 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 CHORDC1Q9UHD1 332 aaPredicted RBP18.89■□□□□ 0.61
SMN1-204ENST00000506163 FBXL21Q9UKT6 434 aa18.89■□□□□ 0.61
SMN1-204ENST00000506163 NUP210Q8TEM1 1887 aaPredicted RBP18.89■□□□□ 0.61
SMN1-204ENST00000506163 F5P12259 2224 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 FAM92AA1XBS5 289 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 KCNJ18B7U540 433 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 ARNTLO00327 626 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 DDX6P26196 483 aaKnown RBP eCLIP18.88■□□□□ 0.61
SMN1-204ENST00000506163 YWHAQP27348 245 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 ZXDBP98169 803 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 KCNJ12Q14500 433 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 MAN2A1Q16706 1144 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 CDKAL1Q5VV42 579 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 CWF19L1Q69YN2 538 aaKnown RBP18.88■□□□□ 0.61
SMN1-204ENST00000506163 TRIM65Q6PJ69 517 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 TMEM270Q6UE05 265 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 TTC30AQ86WT1 665 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 FBXL6Q8N531 539 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 ARL14EPQ8N8R7 260 aaPredicted RBP18.88■□□□□ 0.61
SMN1-204ENST00000506163 JAKMIP2Q96AA8 810 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 TUBGCP2Q9BSJ2 902 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 RNF38Q9H0F5 515 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 TRPC7Q9HCX4 862 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 SIX2Q9NPC8 291 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 ANO10Q9NW15 660 aa18.88■□□□□ 0.61
SMN1-204ENST00000506163 SOBPA7XYQ1 873 aa18.87■□□□□ 0.61
SMN1-204ENST00000506163 PON1P27169 355 aa18.87■□□□□ 0.61
SMN1-204ENST00000506163 GDI1P31150 447 aa18.87■□□□□ 0.61
SMN1-204ENST00000506163 VCPP55072 806 aaKnown RBP18.87■□□□□ 0.61
SMN1-204ENST00000506163 GCNT1Q02742 428 aa18.87■□□□□ 0.61
SMN1-204ENST00000506163 TYRO3Q06418 890 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms