RNA–Protein interactions for RNA: ENST00000502980.1

CLDND1-207, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-207ENST00000502980 CCDC142Q17RM4 750 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 FAM78AQ5JUQ0 283 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 SCML4Q8N228 414 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 ANKRD52Q8NB46 1076 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 ZMIZ2Q8NF64 920 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 SLC2A14Q8TDB8 520 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 MRPS31Q92665 395 aaKnown RBP18.3■□□□□ 0.52
CLDND1-207ENST00000502980 FGF14Q92915 247 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 DUSP16Q9BY84 665 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 INTS2Q9H0H0 1204 aaKnown RBP18.3■□□□□ 0.52
CLDND1-207ENST00000502980 ATXN3LQ9H3M9 355 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 TMEM30AQ9NV96 361 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 GCNT4Q9P109 453 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 APEX2Q9UBZ4 518 aa18.3■□□□□ 0.52
CLDND1-207ENST00000502980 ZNF638Q14966 1978 aaKnown RBP18.3■□□□□ 0.52
CLDND1-207ENST00000502980 OBSL1O75147 1896 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 KCNJ18B7U540 433 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 OLFM2O95897 454 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 ZDHHC11BP0C7U3 371 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 FAM200BP0CF97 657 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 NPR3P17342 541 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 MFAP3P55082 362 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 KCNJ12Q14500 433 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 TEAD2Q15562 447 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 PHLDB3Q6NSJ2 640 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 PARM1Q6UWI2 310 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 CLEC20AQ6ZU45 233 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 MFSD6LQ8IWD5 586 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 SCN4BQ8IWT1 228 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 CMTM8Q8IZV2 173 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 PPM1KQ8N3J5 372 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 C12orf29Q8N999 325 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 GIPC2Q8TF65 315 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 DNASE1L2Q92874 299 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 MCRS1Q96EZ8 462 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 SLITRK1Q96PX8 696 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 SMOQ99835 787 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 ARID3AQ99856 593 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
CLDND1-207ENST00000502980 ANAPC1Q9H1A4 1944 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 HHLA1C9JL84 531 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 TADA3O75528 432 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 AP1G2O75843 785 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 CLSTN1O94985 981 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 GLULP15104 373 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 PON1P27169 355 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 GPR15P49685 360 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 NUBP1P53384 320 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 NCAPHQ15003 741 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 PKDCCQ504Y2 493 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 PPP1R26Q5T8A7 1209 aaPredicted RBP18.28■□□□□ 0.52
CLDND1-207ENST00000502980 CAVIN1Q6NZI2 390 aaKnown RBP18.28■□□□□ 0.52
CLDND1-207ENST00000502980 C1orf228Q6PIY5 440 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 ARID3BQ8IVW6 561 aaPredicted RBP18.28■□□□□ 0.52
CLDND1-207ENST00000502980 ZSCAN18Q8TBC5 510 aaPredicted RBP18.28■□□□□ 0.52
CLDND1-207ENST00000502980 HEXIM2Q96MH2 286 aaKnown RBP18.28■□□□□ 0.52
CLDND1-207ENST00000502980 ZSWIM3Q96MP5 696 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 SLC46A2Q9BY10 475 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 C11orf16Q9NQ32 467 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 PLCB1Q9NQ66 1216 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 KRT82Q9NSB4 513 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 SAMSN1Q9NSI8 373 aaKnown RBP18.28■□□□□ 0.52
CLDND1-207ENST00000502980 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
CLDND1-207ENST00000502980 USP3Q9Y6I4 520 aa18.28■□□□□ 0.52
CLDND1-207ENST00000502980 ZNF840PA6NDX5 716 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 CLDN5O00501 218 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 NRG2O14511 850 aaPredicted RBP18.27■□□□□ 0.52
CLDND1-207ENST00000502980 ASGR2P07307 311 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 PSMC3P17980 439 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 CD58P19256 250 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 YWHAQP27348 245 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 PSEN1P49768 467 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 CACNA2D1P54289 1103 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 SLC8A3P57103 927 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 PLCB2Q00722 1185 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 CNGA2Q16280 664 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 SGO2Q562F6 1265 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 RAB41Q5JT25 222 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 GPR158Q5T848 1215 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 DPY19L2P1Q6NXN4 242 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 LCLAT1Q6UWP7 414 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 C11orf57Q6ZUT1 292 aaPredicted RBP18.27■□□□□ 0.52
CLDND1-207ENST00000502980 ING5Q8WYH8 240 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 SHC3Q92529 594 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 MSANTD3Q96H12 275 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 KREMEN1Q96MU8 473 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 KCNK16Q96T55 309 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 MED10Q9BTT4 135 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 TRPM5Q9NZQ8 1165 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 SCML2Q9UQR0 700 aa18.27■□□□□ 0.52
CLDND1-207ENST00000502980 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
CLDND1-207ENST00000502980 O00370 1275 aa18.26■□□□□ 0.51
CLDND1-207ENST00000502980 CHADO15335 359 aa18.26■□□□□ 0.51
CLDND1-207ENST00000502980 OAS1P00973 400 aaKnown RBP18.26■□□□□ 0.51
CLDND1-207ENST00000502980 TPM2P07951 284 aa18.26■□□□□ 0.51
CLDND1-207ENST00000502980 SETSIPP0DME0 302 aa18.26■□□□□ 0.51
CLDND1-207ENST00000502980 CCDC130P13994 396 aa18.26■□□□□ 0.51
CLDND1-207ENST00000502980 KIF11P52732 1056 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms