RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 YWHAEP62258 255 aaKnown RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 CUL2Q13617 745 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 DPCR1Q3MIW9 517 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 CT47A1Q5JQC4 288 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 CELF5Q8N6W0 485 aaKnown RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 EHBP1Q8NDI1 1231 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 TMEM176AQ96HP8 235 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 SHDQ96IW2 340 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 NT5C1BQ96P26 610 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 MED15Q96RN5 788 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 HNRNPABQ99729 332 aaKnown RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 TRPC7Q9HCX4 862 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 ARHGEF3Q9NR81 526 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 KRT82Q9NSB4 513 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 OBP2AQ9NY56 170 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 ABL1P00519 1130 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 FAM200BP0CF97 657 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 TBXAS1P24557 533 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-213ENST00000498495 YWHAQP27348 245 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 CLCN5P51795 746 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 MAP3K7CLP57077 242 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 TAF10Q12962 218 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 SASS6Q6UVJ0 657 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 BPIFB1Q8TDL5 484 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 RSPRY1Q96DX4 576 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 CNOT6LQ96LI5 555 aaKnown RBP13.57□□□□□ -0.24
HSPG2-213ENST00000498495 SMOQ99835 787 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 ARID3AQ99856 593 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 TTLL2Q9BWV7 592 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 THG1LQ9NWX6 298 aaKnown RBP13.57□□□□□ -0.24
HSPG2-213ENST00000498495 COMMD8Q9NX08 183 aa13.57□□□□□ -0.24
HSPG2-213ENST00000498495 TRAV19A0A0A6YYK7 116 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 CHADO15335 359 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 TADA3O75528 432 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 BEST1O76090 585 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 USP17L7P0C7H9 530 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 NPR3P17342 541 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 HDCP19113 662 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 MTIF2P46199 727 aaKnown RBP13.56□□□□□ -0.24
HSPG2-213ENST00000498495 PDE6CP51160 858 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 RAD23BP54727 409 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 PRKCQQ04759 706 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-213ENST00000498495 PPP1R26Q5T8A7 1209 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-213ENST00000498495 IER5LQ5T953 404 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-213ENST00000498495 FAM114A1Q8IWE2 563 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 SLC4A11Q8NBS3 891 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 LMO3Q8TAP4 145 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 CSGALNACT1Q8TDX6 532 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 DNASE1L2Q92874 299 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 LRRC3BQ96PB8 259 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 CYP2S1Q96SQ9 504 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 SMG9Q9H0W8 520 aaKnown RBP13.56□□□□□ -0.24
HSPG2-213ENST00000498495 THAP9Q9H5L6 903 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 CSNK1G1Q9HCP0 422 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 TDP1Q9NUW8 608 aa13.56□□□□□ -0.24
HSPG2-213ENST00000498495 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-213ENST00000498495 ZNF840PA6NDX5 716 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 TNFRSF10BO14763 440 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 PRAMEF12O95522 483 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 CKMP06732 381 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 SLC5A3P53794 718 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 VCPP55072 806 aaKnown RBP13.55□□□□□ -0.24
HSPG2-213ENST00000498495 STARD6P59095 220 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 FCHO2Q0JRZ9 810 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 RBM43Q6ZSC3 357 aaKnown RBP13.55□□□□□ -0.24
HSPG2-213ENST00000498495 CLEC20AQ6ZU45 233 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 RRAGAQ7L523 313 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 ARL14EPQ8N8R7 260 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-213ENST00000498495 PDZD8Q8NEN9 1154 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 ZMIZ2Q8NF64 920 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 SCAMP5Q8TAC9 235 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-213ENST00000498495 DUSP16Q9BY84 665 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 FBXO44Q9H4M3 255 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 TBC1D17Q9HA65 648 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 KIF9Q9HAQ2 790 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 TRPV5Q9NQA5 729 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 HEBP1Q9NRV9 189 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 RAPGEFL1Q9UHV5 662 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 KIAA1257Q9ULG3 409 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
HSPG2-213ENST00000498495 C2orf78A6NCI8 922 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 PI15O43692 258 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 CD19P15391 556 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 PFKLP17858 780 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 AOC1P19801 751 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 SLC8A3P57103 927 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms