RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HEPACAM2A8MVW5 462 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 STK25O00506 426 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 PES1O00541 588 aaKnown RBP16.89■□□□□ 0.29
LIME1-209ENST00000494776 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
LIME1-209ENST00000494776 ABL1P00519 1130 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.29
LIME1-209ENST00000494776 PSMC3P17980 439 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 USP46P62068 366 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 PFKPQ01813 784 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 GRM2Q14416 872 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 STX1AQ16623 288 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 BMP8AQ7Z5Y6 402 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 TMEM150AQ86TG1 271 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 IRF2BP1Q8IU81 584 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 CMTM8Q8IZV2 173 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 SIX5Q8N196 739 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 SLITRK1Q96PX8 696 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 INTS2Q9H0H0 1204 aaKnown RBP16.89■□□□□ 0.29
LIME1-209ENST00000494776 BRD9Q9H8M2 597 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 SLC2A4RGQ9NR83 387 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 TMEM30AQ9NV96 361 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
LIME1-209ENST00000494776 YWHAQP27348 245 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 PPP3CCP48454 512 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 RAD23BP54727 409 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 PPP1R26Q5T8A7 1209 aaPredicted RBP16.88■□□□□ 0.29
LIME1-209ENST00000494776 CAVIN1Q6NZI2 390 aaKnown RBP16.88■□□□□ 0.29
LIME1-209ENST00000494776 VITQ6UXI7 678 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 RRAGAQ7L523 313 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 MON1AQ86VX9 555 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 MFSD6LQ8IWD5 586 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 SLC4A11Q8NBS3 891 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 LMO3Q8TAP4 145 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 DEPDC1BQ8WUY9 529 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 FBXO32Q969P5 355 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 JAKMIP2Q96AA8 810 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 SMOQ99835 787 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 CRACR2AQ9BSW2 395 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 TTLL2Q9BWV7 592 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 PCDHB4Q9Y5E5 795 aa16.88■□□□□ 0.29
LIME1-209ENST00000494776 TRAV19A0A0A6YYK7 116 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 SOBPA7XYQ1 873 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 KCNJ18B7U540 433 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 ZNF263O14978 683 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 TADA3O75528 432 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 BEST1O76090 585 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 CD19P15391 556 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 GDI1P31150 447 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 PDE6CP51160 858 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 SLC5A3P53794 718 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 SLC8A3P57103 927 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 TAF10Q12962 218 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 KCNJ12Q14500 433 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 MAN2A1Q16706 1144 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 SGO2Q562F6 1265 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 TMEM270Q6UE05 265 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 GBP6Q6ZN66 633 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 FBXL6Q8N531 539 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 CELF5Q8N6W0 485 aaKnown RBP16.87■□□□□ 0.29
LIME1-209ENST00000494776 TTC16Q8NEE8 873 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 FLCNQ8NFG4 579 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 ENOX1Q8TC92 643 aaKnown RBP16.87■□□□□ 0.29
LIME1-209ENST00000494776 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 SMG9Q9H0W8 520 aaKnown RBP16.87■□□□□ 0.29
LIME1-209ENST00000494776 CSNK1G1Q9HCP0 422 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
LIME1-209ENST00000494776 TMEM63CQ9P1W3 806 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 NFE2L3Q9Y4A8 694 aa16.87■□□□□ 0.29
LIME1-209ENST00000494776 PDGFBP01127 241 aaPredicted RBP16.86■□□□□ 0.29
LIME1-209ENST00000494776 CKMP06732 381 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 USP17L7P0C7H9 530 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 PTMSP20962 102 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 WEE1P30291 646 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 PLA2G5P39877 138 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 GCNT1Q02742 428 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 EXOC3L4Q17RC7 722 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 CLEC20AQ6ZU45 233 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 ARHGEF19Q8IW93 802 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 SCAMP5Q8TAC9 235 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 IRF7Q92985 503 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 SHDQ96IW2 340 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 DUSP16Q9BY84 665 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 FBXO44Q9H4M3 255 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
LIME1-209ENST00000494776 ARHGEF3Q9NR81 526 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 THG1LQ9NWX6 298 aaKnown RBP16.86■□□□□ 0.29
LIME1-209ENST00000494776 COMMD8Q9NX08 183 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 OBP2AQ9NY56 170 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 PTPRDP23468 1912 aa16.86■□□□□ 0.29
LIME1-209ENST00000494776 C2orf78A6NCI8 922 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 PRAMEF12O95522 483 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 TPM2P07951 284 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 VDRP11473 427 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 NPR3P17342 541 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 HDCP19113 662 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 VWA3BQ502W6 1294 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 SLC44A4Q53GD3 710 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 TCP11X2Q5H9J9 407 aa16.85■□□□□ 0.29
LIME1-209ENST00000494776 C11orf57Q6ZUT1 292 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms