RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ST6GALNAC4Q9H4F1 302 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 RPF1Q9H9Y2 349 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 OBP2AQ9NY56 170 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 RWDD2AQ9UIY3 292 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 ZMIZ1Q9ULJ6 1067 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 EXOC7Q9UPT5 735 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 NUP205Q92621 2012 aa12.6□□□□□ -0.39
CSNK1E-212ENST00000494610 CYB561D2O14569 222 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 HNRNPDLO14979 420 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 OGTO15294 1046 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 TADA3O75528 432 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 GCNT3O95395 438 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 PROS1P07225 676 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 HAPLN1P10915 354 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 BCKDHBP21953 392 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 GJA4P35212 333 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 NOVA1P51513 510 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 SNRPFP62306 86 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 GRSF1Q12849 480 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 DDR2Q16832 855 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 BMT2Q1RMZ1 405 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 ISM2Q6H9L7 571 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 SFTPA1Q8IWL2 248 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 ANKRD20A12PQ8NF67 263 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 ENOX1Q8TC92 643 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 KCNN1Q92952 543 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 ZC3H10Q96K80 434 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 MSTO1Q9BUK6 570 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 TMEM206Q9H813 350 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 SLC39A2Q9NP94 309 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 THG1LQ9NWX6 298 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 CPSF3Q9UKF6 684 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 TBX20Q9UMR3 447 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 CTNND2Q9UQB3 1225 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 BPTFQ12830 3046 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 GON4LQ3T8J9 2241 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 KIAA1549LQ6ZVL6 1849 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 THADAQ6YHU6 1953 aa12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 FASNP49327 2511 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-212ENST00000494610 A0A0B4J269 797 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 LNP1A1A4G5 178 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 ANO9A1A5B4 782 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 CYP11A1P05108 521 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 ADRB2P07550 413 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 BMP6P22004 513 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 ACAT1P24752 427 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 WEE1P30291 646 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 CDC25CP30307 473 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 AVPR1AP37288 418 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 PRCPP42785 496 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 SEC13P55735 322 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 STK4Q13043 487 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 TMEM132DQ14C87 1099 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 VEPH1Q14D04 833 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 CACNA1EQ15878 2313 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 TAF12Q16514 161 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 KLHL10Q6JEL2 608 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 UNQ6494/PRO21346Q6UXR6 183 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 HS2ST1Q7LGA3 356 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 FAM114A1Q8IWE2 563 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 NELFBQ8WX92 580 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 GCNAQ96QF7 691 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 P2RY13Q9BPV8 354 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 OXCT2Q9BYC2 517 aaPredicted RBP12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 LINC00597Q9H2U6 94 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 TRPC7Q9HCX4 862 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 VPS45Q9NRW7 570 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 TDP1Q9NUW8 608 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 WASF3Q9UPY6 502 aa12.58□□□□□ -0.4
CSNK1E-212ENST00000494610 ASCC3Q8N3C0 2202 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 PPP1R3GB7ZBB8 358 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 SCAMP3O14828 347 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 FOXD2O60548 495 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 FGF19O95750 216 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 CYP2F1P24903 491 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 GBP1P32455 592 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 TUFMP49411 452 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 DGKEP52429 567 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 MESP2Q0VG99 397 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 BFSP1Q12934 665 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 DMC1Q14565 340 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 EDRF1Q3B7T1 1238 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 KIAA1211LQ6NV74 962 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 EPM2AIP1Q7L775 607 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 ZNF720Q7Z2F6 126 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 EFCAB13Q8IY85 973 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms