RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MON1AQ86VX9 555 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 ARL14EPQ8N8R7 260 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-224ENST00000494132 BPIFB1Q8TDL5 484 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 DNASE1L2Q92874 299 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 IRF7Q92985 503 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 USP13Q92995 863 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-224ENST00000494132 SLC35C1Q96A29 364 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 JAKMIP2Q96AA8 810 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 SPATA17Q96L03 361 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 C8orf48Q96LL4 319 aa15.62■□□□□ 0.09
ATG4B-224ENST00000494132 KANSL1LA0AUZ9 987 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 SHISA7A6NL88 538 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 STX10O60499 249 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 CILPO75339 1184 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 AP1G2O75843 785 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 ABL1P00519 1130 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 CKMP06732 381 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 GLULP15104 373 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 TARSP26639 723 aaKnown RBP15.61■□□□□ 0.09
ATG4B-224ENST00000494132 PLA2G5P39877 138 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 PPP1R2P41236 205 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 MCCD1P59942 119 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-224ENST00000494132 NHLH1Q02575 133 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 PRKCQQ04759 706 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 TNK2Q07912 1038 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 FCHO2Q0JRZ9 810 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 INCA1Q0VD86 236 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 PHLDB3Q6NSJ2 640 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 FILIP1Q7Z7B0 1213 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 UNC93AQ86WB7 457 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 CCDC105Q8IYK2 499 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 CELF5Q8N6W0 485 aaKnown RBP15.61■□□□□ 0.09
ATG4B-224ENST00000494132 PJA1Q8NG27 643 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 WHAMMQ8TF30 809 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 E2F7Q96AV8 911 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 SMARCD1Q96GM5 515 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 SHDQ96IW2 340 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 PHOX2BQ99453 314 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 LTB4R2Q9NPC1 389 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 GTSE1Q9NYZ3 720 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 NDRG2Q9UN36 371 aaKnown RBP15.61■□□□□ 0.09
ATG4B-224ENST00000494132 SIT1Q9Y3P8 196 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 ATP8B3O60423 1300 aa15.61■□□□□ 0.09
ATG4B-224ENST00000494132 BICDL2A1A5D9 508 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 ARNTLO00327 626 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-224ENST00000494132 DDX6P26196 483 aaKnown RBP eCLIP15.6■□□□□ 0.09
ATG4B-224ENST00000494132 FMO5P49326 533 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 MAP3K7CLP57077 242 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 TAF10Q12962 218 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 TRIM68Q6AZZ1 485 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 FRMD5Q7Z6J6 570 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 CRYBG2Q8N1P7 616 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 DTWD2Q8NBA8 298 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 ZMIZ2Q8NF64 920 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 SCAMP5Q8TAC9 235 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 CSGALNACT1Q8TDX6 532 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 CEP63Q96MT8 703 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 SMOQ99835 787 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 DDX23Q9BUQ8 820 aaKnown RBP15.6■□□□□ 0.09
ATG4B-224ENST00000494132 NT5C1AQ9BXI3 368 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 SRRTQ9BXP5 876 aaKnown RBP15.6■□□□□ 0.09
ATG4B-224ENST00000494132 KCNH6Q9H252 994 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 CLSTN2Q9H4D0 955 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 CYP3A43Q9HB55 503 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 DMAP1Q9NPF5 467 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-224ENST00000494132 TDP1Q9NUW8 608 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 ARIH1Q9Y4X5 557 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-224ENST00000494132 PIAS3Q9Y6X2 628 aa15.6■□□□□ 0.09
ATG4B-224ENST00000494132 TRAV19A0A0A6YYK7 116 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 FAM170BA6NMN3 283 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 CHADO15335 359 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 SLC5A3P53794 718 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 PTPN5P54829 565 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 ARHGAP29Q52LW3 1261 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 WDR44Q5JSH3 913 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 CREBRFQ8IUR6 639 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 NUP93Q8N1F7 819 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 TRIML1Q8N9V2 468 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 FBXO32Q969P5 355 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 CYFIP2Q96F07 1278 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 MED15Q96RN5 788 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 TTLL2Q9BWV7 592 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 METTL14Q9HCE5 456 aaKnown RBP15.59■□□□□ 0.09
ATG4B-224ENST00000494132 CISHQ9NSE2 258 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 LMBRD1Q9NUN5 540 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 OBP2AQ9NY56 170 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 TRPM5Q9NZQ8 1165 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 GCNT4Q9P109 453 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 DLGAP2Q9P1A6 1054 aa15.59■□□□□ 0.09
ATG4B-224ENST00000494132 FANCMQ8IYD8 2048 aa15.58■□□□□ 0.09
ATG4B-224ENST00000494132 ZNF840PA6NDX5 716 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 SCAMP3O14828 347 aaKnown RBP15.58■□□□□ 0.08
ATG4B-224ENST00000494132 HDCP19113 662 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 YWHAQP27348 245 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 WEE1P30291 646 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 KPNA1P52294 538 aaPredicted RBP15.58■□□□□ 0.08
ATG4B-224ENST00000494132 PPP1R26Q5T8A7 1209 aaPredicted RBP15.58■□□□□ 0.08
ATG4B-224ENST00000494132 GPRIN1Q7Z2K8 1008 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 PRRX2Q99811 253 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms