RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 PLEKHG4Q58EX7 1191 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 RIOX2Q8IUF8 465 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 IGDCC3Q8IVU1 814 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 PALM2Q8IXS6 379 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 PDIK1LQ8N165 341 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC4A11Q8NBS3 891 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 ZNF668Q96K58 619 aaPredicted RBP16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 C12orf65Q9H3J6 166 aaKnown RBP16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 FZD8Q9H461 694 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 SYNCQ9H7C4 482 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC17A7Q9P2U7 560 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 HMGXB4Q9UGU5 601 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 SMAPO00193 183 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 C2CD2LO14523 706 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 TM9SF1O15321 606 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 DIAPH2O60879 1101 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 ARIH2O95376 493 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 TRUB2O95900 331 aaKnown RBP16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 GJB1P08034 283 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 KRT19P08727 400 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 CXCL8P10145 99 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 TSHRP16473 764 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 DPYSL3Q14195 570 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC45A4Q5BKX6 768 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 SPDYAQ5MJ70 313 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 NLRP9Q7RTR0 991 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 HSPH1Q92598 858 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 MCRS1Q96EZ8 462 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 RSRC1Q96IZ7 334 aaKnown RBP16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 GPR20Q99678 358 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 NPHS2Q9NP85 383 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 NUMBLQ9Y6R0 609 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 WDR91A4D1P6 747 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 GOLGA8RI6L899 631 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 FZD9O00144 591 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 LGR5O75473 907 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 RBP3P10745 1247 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 RNASELQ05823 741 aaKnown RBP16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 HSDL1Q3SXM5 330 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 C1orf127Q8N9H9 656 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 ZNF398Q8TD17 642 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 PEBP4Q96S96 227 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 KLF6Q99612 283 aaPredicted RBP16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 ELOVL4Q9GZR5 314 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 SMYD3Q9H7B4 428 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 KANSL3Q9P2N6 904 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 USP18Q9UMW8 372 aa16.87■□□□□ 0.29
SEMA4D-220ENST00000492386 MCF2LO15068 1137 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 CBX6O95503 412 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 NFICP08651 508 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 GABRB2P47870 512 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 CLNS1AP54105 237 aaKnown RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 BASP1P80723 227 aaKnown RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 PTPN11Q06124 597 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 TAF1BQ53T94 588 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 ZNF449Q6P9G9 518 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 SPATA18Q8TC71 538 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 ALKBH8Q96BT7 664 aaKnown RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 ZNF570Q96NI8 536 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 CALN1Q9BXU9 219 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 CDT1Q9H211 546 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 VPS11Q9H270 941 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 CHMP2BQ9UQN3 213 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 INO80B-WBP1J3KQ70 363 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 TRAFD1O14545 582 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 MICAL2O94851 1124 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 ATP2A2P16615 1042 aaKnown RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 ELK3P41970 407 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 ACAP1Q15027 740 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 FYB2Q5VWT5 728 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 MAB21L3Q8N8X9 362 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 TRPM4Q8TD43 1214 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 TRAPPC12Q8WVT3 735 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 NLRP4Q96MN2 994 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 CYTH2Q99418 400 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 TBC1D10AQ9BXI6 508 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 MINDY3Q9H8M7 445 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 RSAD1Q9HA92 442 aa16.86■□□□□ 0.29
SEMA4D-220ENST00000492386 CILPO75339 1184 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 RNF8O76064 485 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 ENDOD1O94919 500 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 IL18RAPO95256 599 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 CCNG1P51959 295 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 MBTD1Q05BQ5 628 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 MMRN1Q13201 1228 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 PRKG1Q13976 671 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 CTC1Q2NKJ3 1217 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 NPNTQ6UXI9 565 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 CYP4V2Q6ZWL3 525 aaPredicted RBP16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 FAM13CQ8NE31 585 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 CXorf38Q8TB03 319 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 PTPRN2Q92932 1015 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 R3HDMLQ9H3Y0 253 aa16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 RPF1Q9H9Y2 349 aaKnown RBP16.85■□□□□ 0.29
SEMA4D-220ENST00000492386 NKX1-2Q9UD57 310 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms