RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	LRRN2	O75325	713 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	CILP	O75339	1184 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	AP1G2	O75843	785 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	PPP3CC	P48454	512 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	FMO5	P49326	533 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	PDE6C	P51160	858 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	CACNA2D1	P54289	1103 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	STARD6	P59095	220 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	FCHO2	Q0JRZ9	810 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	CWF19L1	Q69YN2	538 aa	Known RBP	11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	FUK	Q8N0W3	1084 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	NUP93	Q8N1F7	819 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	CELF5	Q8N6W0	485 aa	Known RBP	11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	C12orf29	Q8N999	325 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	SLC39A7	Q92504	469 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	RSPRY1	Q96DX4	576 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	KCNK16	Q96T55	309 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	TTLL2	Q9BWV7	592 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	SMG9	Q9H0W8	520 aa	Known RBP	11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	TRPC7	Q9HCX4	862 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	TRPV5	Q9NQA5	729 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	KRT82	Q9NSB4	513 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	CISH	Q9NSE2	258 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	FAM49B	Q9NUQ9	324 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	THG1L	Q9NWX6	298 aa	Known RBP	11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	TRPM5	Q9NZQ8	1165 aa		11.77	□□□□□ -0.53
GGA1-222	ENST00000489772	NOTCH4	Q99466	2003 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	DOCK8	Q8NF50	2099 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	TRAV19	A0A0A6YYK7	116 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	CHAD	O15335	359 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	P4HA2	O15460	535 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	ATMIN	O43313	823 aa	Predicted RBP	11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	TADA3	O75528	432 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	RTN3	O95197	1032 aa	Predicted RBP	11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	PRAMEF12	O95522	483 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	FAM200B	P0CF97	657 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	CCDC192	P0DO97	292 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	C7	P10643	843 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	CCDC130	P13994	396 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	YWHAQ	P27348	245 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	USP46	P62068	366 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	CUL2	Q13617	745 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	ARHGAP29	Q52LW3	1261 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	IER5L	Q5T953	404 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	ZNF852	Q6ZMS4	543 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	PAQR9	Q6ZVX9	377 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	TMEM105	Q8N8V8	129 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	BPIFB1	Q8TDL5	484 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	TATDN2	Q93075	761 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	CYFIP2	Q96F07	1278 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	HEXIM2	Q96MH2	286 aa	Known RBP	11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	SLITRK1	Q96PX8	696 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	TWNK	Q96RR1	684 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	KIF9	Q9HAQ2	790 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	HEBP1	Q9NRV9	189 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	TDP1	Q9NUW8	608 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	TMEM30A	Q9NV96	361 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	DACH1	Q9UI36	760 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	SIT1	Q9Y3P8	196 aa		11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
GGA1-222	ENST00000489772	MYO10	Q9HD67	2058 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	KANSL1L	A0AUZ9	987 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	ZNF840P	A6NDX5	716 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	PI15	O43692	258 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	CKM	P06732	381 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	USP17L7	P0C7H9	530 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	PFKL	P17858	780 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	TBXAS1	P24557	533 aa	Predicted RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	ADORA2B	P29275	332 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	MARS	P56192	900 aa	Known RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	YWHAE	P62258	255 aa	Known RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	PLCB2	Q00722	1185 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	IFRD2	Q12894	506 aa	Predicted RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	TAF10	Q12962	218 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	ZNF268	Q14587	947 aa	Predicted RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	TPD52L1	Q16890	204 aa	Predicted RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	ZNF394	Q53GI3	561 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	TPRG1	Q6ZUI0	275 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	CREBRF	Q8IUR6	639 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	TRIM59	Q8IWR1	403 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	CSGALNACT1	Q8TDX6	532 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	WHAMM	Q8TF30	809 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	USP13	Q92995	863 aa	Predicted RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	TMEM176A	Q96HP8	235 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	LRRC3B	Q96PB8	259 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	HNRNPAB	Q99729	332 aa	Known RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	ARID3A	Q99856	593 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	DDX23	Q9BUQ8	820 aa	Known RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	COMMD8	Q9NX08	183 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	CCL26	Q9Y258	94 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	MRPS17	Q9Y2R5	130 aa	Known RBP	11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	DOCK6	Q96HP0	2047 aa		11.75	□□□□□ -0.53
GGA1-222	ENST00000489772	NCAN	O14594	1321 aa		11.74	□□□□□ -0.53
GGA1-222	ENST00000489772	ARNTL	O00327	626 aa		11.74	□□□□□ -0.53
GGA1-222	ENST00000489772	MAN2B1	O00754	1011 aa		11.74	□□□□□ -0.53
GGA1-222	ENST00000489772	ABL1	P00519	1130 aa		11.74	□□□□□ -0.53
GGA1-222	ENST00000489772	AFP	P02771	609 aa	Known RBP	11.74	□□□□□ -0.53
GGA1-222	ENST00000489772	GLUL	P15104	373 aa		11.74	□□□□□ -0.53
GGA1-222	ENST00000489772	HDC	P19113	662 aa		11.74	□□□□□ -0.53
GGA1-222	ENST00000489772	SLC5A3	P53794	718 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms