RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 Q6ZS52 159 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 ACOT1Q86TX2 421 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 KCNK16Q96T55 309 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 HPS4Q9NQG7 708 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 THG1LQ9NWX6 298 aaKnown RBP14.92□□□□□ -0.02
VTI1A-206ENST00000489142 ATG2BQ96BY7 2078 aa14.92□□□□□ -0.02
VTI1A-206ENST00000489142 SCAMP3O14828 347 aaKnown RBP14.91□□□□□ -0.02
VTI1A-206ENST00000489142 USP17L7P0C7H9 530 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 CHRNB1P11230 501 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 KRT13P13646 458 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 PSMC2P35998 433 aaKnown RBP14.91□□□□□ -0.02
VTI1A-206ENST00000489142 MAGEA9P43362 315 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 PLCB2Q00722 1185 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 NFIL3Q16649 462 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 ITPRIPL2Q3MIP1 535 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 NAIF1Q69YI7 327 aaPredicted RBP14.91□□□□□ -0.02
VTI1A-206ENST00000489142 ISM2Q6H9L7 571 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 CC2D1AQ6P1N0 951 aaPredicted RBP14.91□□□□□ -0.02
VTI1A-206ENST00000489142 INTS8Q75QN2 995 aaKnown RBP14.91□□□□□ -0.02
VTI1A-206ENST00000489142 FAM35AQ86V20 835 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 TAS1R2Q8TE23 839 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 C8orf48Q96LL4 319 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 FAM83CQ9BQN1 747 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 ELOVL4Q9GZR5 314 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 CHRDQ9H2X0 955 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 C8orf33Q9H7E9 229 aaPredicted RBP14.91□□□□□ -0.02
VTI1A-206ENST00000489142 APOBEC3GQ9HC16 384 aaKnown RBP14.91□□□□□ -0.02
VTI1A-206ENST00000489142 KRT82Q9NSB4 513 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 FAM49BQ9NUQ9 324 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 GCNT4Q9P109 453 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 ZMYM5Q9UJ78 669 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 WDR87Q6ZQQ6 2873 aa14.91□□□□□ -0.02
VTI1A-206ENST00000489142 TRIM49BA6NDI0 452 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 IKBKBO14920 756 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 MAPK13O15264 365 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 ASS1P00966 412 aaKnown RBP14.9□□□□□ -0.02
VTI1A-206ENST00000489142 FAM163BP0C2L3 166 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 HDCP19113 662 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 RPL13P26373 211 aaKnown RBP14.9□□□□□ -0.02
VTI1A-206ENST00000489142 HOXC13P31276 330 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 NDST1P52848 882 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 PMS1P54277 932 aaKnown RBP14.9□□□□□ -0.02
VTI1A-206ENST00000489142 NOP14P78316 857 aaKnown RBP14.9□□□□□ -0.02
VTI1A-206ENST00000489142 TAF10Q12962 218 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 GAS6Q14393 721 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 MTF1Q14872 753 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 ZNF77Q15935 545 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 PAQR9Q6ZVX9 377 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 RALGPS2Q86X27 583 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-206ENST00000489142 ADSSL1Q8N142 457 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 C12orf29Q8N999 325 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 SCAMP5Q8TAC9 235 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 CHFRQ96EP1 664 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 CCDC34Q96HJ3 373 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 TTLL2Q9BWV7 592 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 KIF9Q9HAQ2 790 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 PRMT8Q9NR22 394 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-206ENST00000489142 C2orf42Q9NWW7 574 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 TRPM5Q9NZQ8 1165 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 PCDHA5Q9Y5H7 936 aa14.9□□□□□ -0.02
VTI1A-206ENST00000489142 FRYLO94915 3013 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 ZNF840PA6NDX5 716 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 GADD45BO75293 160 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-206ENST00000489142 BEST1O76090 585 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 P4HA1P13674 534 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 CD58P19256 250 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 ADORA2BP29275 332 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 ZXDBP98169 803 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 SATB1Q01826 763 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 USP4Q13107 963 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 RUNX3Q13761 415 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 ZNF268Q14587 947 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-206ENST00000489142 EDRF1Q3B7T1 1238 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 ZNF658Q5TYW1 1059 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-206ENST00000489142 ZC3H14Q6PJT7 736 aaKnown RBP14.89□□□□□ -0.03
VTI1A-206ENST00000489142 FUKQ8N0W3 1084 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 SLC2A14Q8TDB8 520 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 SH3RF2Q8TEC5 729 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 SEMA4DQ92854 862 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 SMARCE1Q969G3 411 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 JAKMIP2Q96AA8 810 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 TNIP3Q96KP6 325 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 RMND1Q9NWS8 449 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 DUS2Q9NX74 493 aaKnown RBP14.89□□□□□ -0.03
VTI1A-206ENST00000489142 SMPD4Q9NXE4 827 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 FBXO4Q9UKT5 387 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 ATP8B3O60423 1300 aa14.89□□□□□ -0.03
VTI1A-206ENST00000489142 RIF1Q5UIP0 2472 aaKnown RBP14.88□□□□□ -0.03
VTI1A-206ENST00000489142 AP1G2O75843 785 aa14.88□□□□□ -0.03
VTI1A-206ENST00000489142 SMC2O95347 1197 aa14.88□□□□□ -0.03
VTI1A-206ENST00000489142 MLLT6P55198 1093 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-206ENST00000489142 DCAF17Q5H9S7 520 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-206ENST00000489142 ANKRD40Q6AI12 368 aa14.88□□□□□ -0.03
VTI1A-206ENST00000489142 NUP93Q8N1F7 819 aa14.88□□□□□ -0.03
VTI1A-206ENST00000489142 TAF4BQ92750 862 aa14.88□□□□□ -0.03
VTI1A-206ENST00000489142 FBXO32Q969P5 355 aa14.88□□□□□ -0.03
VTI1A-206ENST00000489142 SMARCD1Q96GM5 515 aa14.88□□□□□ -0.03
VTI1A-206ENST00000489142 MSANTD3Q96H12 275 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms