RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 HSP90AA5PQ58FG0 334 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 CES4AQ5XG92 561 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 DEFB107AQ8IZN7 70 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 GABPB2Q8TAK5 448 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-229ENST00000488765 TMEM121Q9BTD3 319 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 PSTPIP2Q9H939 334 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 SACM1LQ9NTJ5 587 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
MCF2L-229ENST00000488765 STRNO43815 780 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 SORBS3O60504 671 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 CRTAMO95727 393 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 THRAP10827 490 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 CDK8P49336 464 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 GPX6P59796 221 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 SNAP25P60880 206 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 SMUG1Q53HV7 270 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 PPP1R36Q96LQ0 422 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 CENPOQ9BU64 300 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 COQ6Q9Y2Z9 468 aa16.89■□□□□ 0.29
MCF2L-229ENST00000488765 HBS1LQ9Y450 684 aaKnown RBP16.89■□□□□ 0.29
MCF2L-229ENST00000488765 APBA3O96018 575 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 FGRP09769 529 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 TCN1P20061 433 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-229ENST00000488765 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 SH3BGRP55822 239 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-229ENST00000488765 TTBK2Q6IQ55 1244 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 POLNQ7Z5Q5 900 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 PYROXD1Q8WU10 500 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 TCHPQ9BT92 498 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 COPS7BQ9H9Q2 264 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-229ENST00000488765 TIMMDC1Q9NPL8 285 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 ARHGAP10A1A4S6 786 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 OCM2P0CE71 109 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 OCMP0CE72 109 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-229ENST00000488765 BST1Q10588 318 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 HNRNPDQ14103 355 aaKnown RBP16.88■□□□□ 0.29
MCF2L-229ENST00000488765 CLUL1Q15846 466 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 SHROOM1Q2M3G4 852 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-229ENST00000488765 CTAGE3PQ8IX95 158 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 CCT7Q99832 543 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 RBM38Q9H0Z9 239 aaKnown RBP16.88■□□□□ 0.29
MCF2L-229ENST00000488765 SUN2Q9UH99 717 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 DMTF1Q9Y222 760 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 EMSYQ7Z589 1322 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 MYH11P35749 1972 aa16.88■□□□□ 0.29
MCF2L-229ENST00000488765 GOLGA8IPA6NC78 632 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 GOLGA8JA6NMD2 632 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 PDXKO00764 312 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 NCF2P19878 526 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-229ENST00000488765 MRPS22P82650 360 aaKnown RBP16.87■□□□□ 0.29
MCF2L-229ENST00000488765 CHI3L2Q15782 390 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 RINT1Q6NUQ1 792 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 ETNPPLQ8TBG4 499 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 AGR3Q8TD06 166 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 DNM3Q9UQ16 869 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 E9PBE3 544 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 RGL2O15211 777 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 FUCA1P04066 466 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 CDKL1Q00532 357 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 KRT72Q14CN4 511 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 PASD1Q8IV76 773 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 BBS5Q8N3I7 341 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 EBF1Q9UH73 591 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 CEPT1Q9Y6K0 416 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 A0A1W2PQ67 120 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 FUOMA2VDF0 154 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 K7EPI3 171 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 LYPLA1O75608 230 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-229ENST00000488765 LDHCP07864 332 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 FAAP100Q0VG06 881 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 PRKD1Q15139 912 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-229ENST00000488765 VWA5B1Q5TIE3 1220 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 ELMSAN1Q6PJG2 1045 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 TRIM56Q9BRZ2 755 aaKnown RBP16.87■□□□□ 0.29
MCF2L-229ENST00000488765 IFT122Q9HBG6 1241 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 NDUFA13Q9P0J0 144 aa16.87■□□□□ 0.29
MCF2L-229ENST00000488765 GNEQ9Y223 722 aaKnown RBP16.87■□□□□ 0.29
MCF2L-229ENST00000488765 E2F8A0AVK6 867 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 CAPN14A8MX76 684 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 SGK1O00141 431 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 FDX1P10109 184 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 TCF4P15884 667 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 FGFR3P22607 806 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 HDAC4P56524 1084 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 POTEHQ6S545 545 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 DPP8Q6V1X1 898 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-229ENST00000488765 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 PALM2Q8IXS6 379 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 ZCCHC9Q8N567 271 aaKnown RBP16.86■□□□□ 0.29
MCF2L-229ENST00000488765 GRK7Q8WTQ7 553 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 HSPH1Q92598 858 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 CASP10Q92851 521 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 SEMA6AQ9H2E6 1030 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 TRPC7Q9HCX4 862 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 FRMD4BQ9Y2L6 1034 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 CFLARO15519 480 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 KRT5P13647 590 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms