RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 PPP1R2P41236 205 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 MXI1P50539 228 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 DCAF17Q5H9S7 520 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-209ENST00000487617 TCERG1LQ5VWI1 586 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 ZC3H3Q8IXZ2 948 aaKnown RBP21.72■■□□□ 1.07
HDAC4-209ENST00000487617 TTC8Q8TAM2 541 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 TTLL2Q9BWV7 592 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 NIF3L1Q9GZT8 377 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 C8orf33Q9H7E9 229 aaPredicted RBP21.72■■□□□ 1.07
HDAC4-209ENST00000487617 CYP3A43Q9HB55 503 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 TRPM5Q9NZQ8 1165 aa21.72■■□□□ 1.07
HDAC4-209ENST00000487617 C2orf78A6NCI8 922 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 BIN1O00499 593 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 CKMP06732 381 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 USP17L7P0C7H9 530 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 CCDC130P13994 396 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 CD44P16070 742 aaKnown RBP21.71■■□□□ 1.07
HDAC4-209ENST00000487617 TRIM21P19474 475 aaKnown RBP21.71■■□□□ 1.07
HDAC4-209ENST00000487617 MLLT6P55198 1093 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-209ENST00000487617 ZNF268Q14587 947 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-209ENST00000487617 KLHL10Q6JEL2 608 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 PAQR9Q6ZVX9 377 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 C1orf210Q8IVY1 113 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 CRYBG2Q8N1P7 616 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 ARL14EPQ8N8R7 260 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-209ENST00000487617 FBXL13Q8NEE6 735 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 SMARCD1Q96GM5 515 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 MSANTD3Q96H12 275 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 SLC22A12Q96S37 553 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 CYP2S1Q96SQ9 504 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 GKN1Q9NS71 199 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 SPATA6Q9NWH7 488 aaPredicted RBP21.71■■□□□ 1.07
HDAC4-209ENST00000487617 GTSE1Q9NYZ3 720 aa21.71■■□□□ 1.07
HDAC4-209ENST00000487617 MAGEA9P43362 315 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 SOX9P48436 509 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 UBE2HP62256 183 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 TNK2Q07912 1038 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 INCA1Q0VD86 236 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 IFRD2Q12894 506 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-209ENST00000487617 CC2D1AQ6P1N0 951 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-209ENST00000487617 FUKQ8N0W3 1084 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 NUP93Q8N1F7 819 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 TTC16Q8NEE8 873 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 SEMA4DQ92854 862 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 CLDN23Q96B33 292 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 KCNK16Q96T55 309 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 DMAP1Q9NPF5 467 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-209ENST00000487617 KRT82Q9NSB4 513 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 RAB20Q9NX57 234 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 GCNT4Q9P109 453 aa21.7■■□□□ 1.06
HDAC4-209ENST00000487617 ARMCX3Q9UH62 379 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-209ENST00000487617 NUP210Q8TEM1 1887 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-209ENST00000487617 AP1G2O75843 785 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 HDCP19113 662 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 CD58P19256 250 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 BMP6P22004 513 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 PPP3CCP48454 512 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 TAF10Q12962 218 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 FZD5Q13467 585 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 MORC3Q14149 939 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 C1orf228Q6PIY5 440 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 C12orf29Q8N999 325 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 SLC2A14Q8TDB8 520 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 SLITRK1Q96PX8 696 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 TWNKQ96RR1 684 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 NT5C1AQ9BXI3 368 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 FAM49BQ9NUQ9 324 aa21.69■■□□□ 1.06
HDAC4-209ENST00000487617 ZNF840PA6NDX5 716 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 PPP1R3GB7ZBB8 358 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 SPECC1L-ADORA2AF8WAN1 911 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 RTN3O95197 1032 aaPredicted RBP21.68■■□□□ 1.06
HDAC4-209ENST00000487617 ABL1P00519 1130 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 YWHAQP27348 245 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 CTHP32929 405 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 RPS9P46781 194 aaKnown RBP21.68■■□□□ 1.06
HDAC4-209ENST00000487617 PDE6CP51160 858 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 ITPRIPL2Q3MIP1 535 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 CBWD6Q4V339 395 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 WDR44Q5JSH3 913 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 CBWD3Q5JTY5 395 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 CBWD5Q5RIA9 395 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 RALGPS2Q86X27 583 aaPredicted RBP21.68■■□□□ 1.06
HDAC4-209ENST00000487617 ZNF687Q8N1G0 1237 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 RIN3Q8TB24 985 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 NELFBQ8WX92 580 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 CEP63Q96MT8 703 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 FAM83CQ9BQN1 747 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 TICRRQ7Z2Z1 1910 aa21.68■■□□□ 1.06
HDAC4-209ENST00000487617 COL4A2P08572 1712 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 LAMTOR5O43504 91 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 CILPO75339 1184 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 PFKLP17858 780 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 ADORA2BP29275 332 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 NBL1P41271 181 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 SLC5A3P53794 718 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 MTF1Q14872 753 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 ZNF77Q15935 545 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 TRIM68Q6AZZ1 485 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 FRMD5Q7Z6J6 570 aa21.67■■□□□ 1.06
HDAC4-209ENST00000487617 FBXO32Q969P5 355 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms