RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 RPS6KA2Q15349 733 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 SMAD1Q15797 465 aaKnown RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 FBXO47Q5MNV8 452 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 BTBD8Q5XKL5 378 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 ZSWIM2Q8NEG5 633 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 CLMNQ96JQ2 1002 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 VCX3BQ9H321 246 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 XAB2Q9HCS7 855 aaKnown RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 SNTG2Q9NY99 539 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 SLC24A2Q9UI40 661 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 NOCTQ9UK39 431 aaKnown RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 KPNA7A9QM74 516 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 NFKBIEO00221 500 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 GRIN3BO60391 1043 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ADCYAP1R1P41586 468 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 HADHBP55084 474 aaKnown RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ACAP1Q15027 740 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 CNPY4Q8N129 248 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ERP27Q96DN0 273 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 NPHS2Q9NP85 383 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 MAFBQ9Y5Q3 323 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 C17orf102A2RUQ5 167 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 PMM2O15305 246 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 LUC7L3O95232 432 aaKnown RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 C4BPAP04003 597 aaKnown RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 RPL7AP62424 266 aaKnown RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ACTN3Q08043 901 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ITIH4Q14624 930 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 DENND1BQ6P3S1 775 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 USP50Q70EL3 339 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ZNF410Q86VK4 478 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 RASSF3Q86WH2 238 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 SLC7A14Q8TBB6 771 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 GBA2Q9HCG7 927 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 AFG3L2Q9Y4W6 797 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 GOLGA8QA0A0J9YX86 632 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 GOLGA8OA6NCC3 632 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 SIGLEC16A6NMB1 481 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 GOLGA8NF8WBI6 632 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 TRAPPC3O43617 180 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ATP9BO43861 1147 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 SHBGP04278 402 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 NFICP08651 508 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 CRYGNQ8WXF5 182 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ABCA3Q99758 1704 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 SPECC1L-ADORA2AF8WAN1 911 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 TXNDC9O14530 226 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 MOCS2O96007 188 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 EGFRP00533 1210 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 MIPP30301 263 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 RFC1P35251 1148 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ARL2P36404 184 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ATP13A4Q4VNC1 1196 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 KIAA1841Q6NSI8 718 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 ART4Q93070 314 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 CCDC97Q96F63 343 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 MAGEB18Q96M61 343 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 TBCBQ99426 244 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 SH3GL2Q99962 352 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
TRA2B-214ENST00000487615 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
TRA2B-214ENST00000487615 CCDC160A6NGH7 325 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-214ENST00000487615 DAB2IPQ5VWQ8 1189 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 CEP120Q8N960 986 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 SLITRK1Q96PX8 696 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 WWP1Q9H0M0 922 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 GMNNO75496 209 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 FLT3P36888 993 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 BST2Q10589 180 aaKnown RBP12.3□□□□□ -0.44
TRA2B-214ENST00000487615 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-214ENST00000487615 MOB2Q70IA6 237 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 ZCCHC9Q8N567 271 aaKnown RBP12.3□□□□□ -0.44
TRA2B-214ENST00000487615 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 TFB1MQ8WVM0 346 aaKnown RBP12.3□□□□□ -0.44
TRA2B-214ENST00000487615 PAFAH2Q99487 392 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 AP4E1Q9UPM8 1137 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 MROH7Q68CQ1 1323 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 TRIM49D1C9J1S8 452 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 M0QYT0 321 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 AGPSO00116 658 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 B4GALT5O43286 388 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-214ENST00000487615 ENPEPQ07075 957 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 MAP1SQ66K74 1059 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-214ENST00000487615 ADGRF2Q8IZF7 708 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 WNK4Q96J92 1243 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 PCMTD2Q9NV79 361 aa12.3□□□□□ -0.44
TRA2B-214ENST00000487615 MMP8P22894 467 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 TAS2R40P59535 323 aa12.29□□□□□ -0.44
TRA2B-214ENST00000487615 CNGA2Q16280 664 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms