RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 TECTAO75443 2155 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 TADA3O75528 432 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 F11P03951 625 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 FAM200BP0CF97 657 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 FCARP24071 287 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 VIPR2P41587 438 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 RAD23BP54727 409 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 PTPN5P54829 565 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 MAP3K7CLP57077 242 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 PPP1R26Q5T8A7 1209 aaPredicted RBP15.65■□□□□ 0.1
USP4-212ENST00000486549 TMEM150AQ86TG1 271 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 MRPS31Q92665 395 aaKnown RBP15.65■□□□□ 0.1
USP4-212ENST00000486549 SMARCD2Q92925 531 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 TMEM176AQ96HP8 235 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 MYRFLQ96LU7 910 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 TUBGCP2Q9BSJ2 902 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 PLA2G2FQ9BZM2 168 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 GPR88Q9GZN0 384 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 MFSD1Q9H3U5 465 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 ZFP14Q9HCL3 533 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 TRPC7Q9HCX4 862 aa15.65■□□□□ 0.1
USP4-212ENST00000486549 ANAPC1Q9H1A4 1944 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 BEST1O76090 585 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 CFHP08603 1231 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 CD19P15391 556 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 PTMSP20962 102 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 GRM2Q14416 872 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 TXNDC8Q6A555 127 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 TMEM270Q6UE05 265 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 GBP6Q6ZN66 633 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 NUP93Q8N1F7 819 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 UBR7Q8N806 425 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 MAB21L3Q8N8X9 362 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 ELSPBP1Q96BH3 223 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 CEP295NLQ96MC4 621 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 HNRNPABQ99729 332 aaKnown RBP15.64■□□□□ 0.09
USP4-212ENST00000486549 SMOQ99835 787 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 SMG9Q9H0W8 520 aaKnown RBP15.64■□□□□ 0.09
USP4-212ENST00000486549 TASP1Q9H6P5 420 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 TAB2Q9NYJ8 693 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 FBXL21Q9UKT6 434 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 PCDHB4Q9Y5E5 795 aa15.64■□□□□ 0.09
USP4-212ENST00000486549 ECI2O75521 394 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 SRFP11831 508 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 SLC9A1P19634 815 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 EEF1GP26641 437 aaKnown RBP15.63■□□□□ 0.09
USP4-212ENST00000486549 AVPR2P30518 371 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 SLC5A3P53794 718 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 MYL5Q02045 173 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 APBA1Q02410 837 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 EXOC3L4Q17RC7 722 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 ANO6Q4KMQ2 910 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 VWA3BQ502W6 1294 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 TCP11X2Q5H9J9 407 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 PHLDB3Q6NSJ2 640 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 TRIM65Q6PJ69 517 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 CLEC20AQ6ZU45 233 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 ARID3BQ8IVW6 561 aaPredicted RBP15.63■□□□□ 0.09
USP4-212ENST00000486549 ZMIZ2Q8NF64 920 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 SLC46A2Q9BY10 475 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 NDST4Q9H3R1 872 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 FAM124BQ9H5Z6 455 aaPredicted RBP15.63■□□□□ 0.09
USP4-212ENST00000486549 UBE2TQ9NPD8 197 aaPredicted RBP15.63■□□□□ 0.09
USP4-212ENST00000486549 FANCLQ9NW38 375 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 EHD2Q9NZN4 543 aa15.63■□□□□ 0.09
USP4-212ENST00000486549 HEPACAM2A8MVW5 462 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 DPYSL4O14531 572 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 RTN3O95197 1032 aaPredicted RBP15.62■□□□□ 0.09
USP4-212ENST00000486549 PRAMEF12O95522 483 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 ABL1P00519 1130 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 ACO1P21399 889 aaKnown RBP15.62■□□□□ 0.09
USP4-212ENST00000486549 DDX6P26196 483 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP4-212ENST00000486549 AVPR1AP37288 418 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 CLCN5P51795 746 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 GPC5P78333 572 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 GCNT1Q02742 428 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 TAF10Q12962 218 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 SGO2Q562F6 1265 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 MIIPQ5JXC2 388 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 CDKAL1Q5VV42 579 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 GJB7Q6PEY0 223 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 VITQ6UXI7 678 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 CMTM8Q8IZV2 173 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 AOPEPQ8N6M6 819 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 SCAMP5Q8TAC9 235 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 FBXO32Q969P5 355 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 RSPRY1Q96DX4 576 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 KREMEN1Q96MU8 473 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 SLITRK1Q96PX8 696 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 TTLL2Q9BWV7 592 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 TRPM5Q9NZQ8 1165 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 WNT16Q9UBV4 365 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 CA14Q9ULX7 337 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 NCANO14594 1321 aa15.62■□□□□ 0.09
USP4-212ENST00000486549 HELZP42694 1942 aaKnown RBP15.61■□□□□ 0.09
USP4-212ENST00000486549 SYCE3A1L190 88 aa15.61■□□□□ 0.09
USP4-212ENST00000486549 GTPBP10A4D1E9 387 aaKnown RBP15.61■□□□□ 0.09
USP4-212ENST00000486549 C2orf78A6NCI8 922 aa15.61■□□□□ 0.09
USP4-212ENST00000486549 PDGFBP01127 241 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms