RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 TWNKQ96RR1 684 aa19.57■□□□□ 0.72
COL1A1-206ENST00000485870 DDX23Q9BUQ8 820 aaKnown RBP19.57■□□□□ 0.72
COL1A1-206ENST00000485870 CYP3A43Q9HB55 503 aa19.57■□□□□ 0.72
COL1A1-206ENST00000485870 FAM49BQ9NUQ9 324 aa19.57■□□□□ 0.72
COL1A1-206ENST00000485870 KIAA1468Q9P260 1216 aa19.57■□□□□ 0.72
COL1A1-206ENST00000485870 CCL26Q9Y258 94 aa19.57■□□□□ 0.72
COL1A1-206ENST00000485870 MYH10P35580 1976 aa19.57■□□□□ 0.72
COL1A1-206ENST00000485870 COL4A2P08572 1712 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 BICDL2A1A5D9 508 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 CHADO15335 359 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 AP1G2O75843 785 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 INCA1Q0VD86 236 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 WDR44Q5JSH3 913 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 FILIP1Q7Z7B0 1213 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 CCDC105Q8IYK2 499 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 FUKQ8N0W3 1084 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 CRYBG2Q8N1P7 616 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 C12orf29Q8N999 325 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 DTWD2Q8NBA8 298 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 SLC2A14Q8TDB8 520 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 CSGALNACT1Q8TDX6 532 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 USP13Q92995 863 aaPredicted RBP19.56■□□□□ 0.72
COL1A1-206ENST00000485870 SLC35C1Q96A29 364 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 SMARCD1Q96GM5 515 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 KCNK16Q96T55 309 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 METTL14Q9HCE5 456 aaKnown RBP19.56■□□□□ 0.72
COL1A1-206ENST00000485870 KRT82Q9NSB4 513 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 EHD2Q9NZN4 543 aa19.56■□□□□ 0.72
COL1A1-206ENST00000485870 MTF2Q9Y483 593 aaPredicted RBP19.56■□□□□ 0.72
COL1A1-206ENST00000485870 TRAV19A0A0A6YYK7 116 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 C2orf78A6NCI8 922 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 FAM170BA6NMN3 283 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 H0Y858 1186 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 ARNTLO00327 626 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TRIM21P19474 475 aaKnown RBP19.55■□□□□ 0.72
COL1A1-206ENST00000485870 ARHGAP29Q52LW3 1261 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 ZNF852Q6ZMS4 543 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 FRMD5Q7Z6J6 570 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TRIML1Q8N9V2 468 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TTC16Q8NEE8 873 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TTC8Q8TAM2 541 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 SLC22A12Q96S37 553 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 CYP2S1Q96SQ9 504 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TTLL2Q9BWV7 592 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 NT5C1AQ9BXI3 368 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 LTB4R2Q9NPC1 389 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 DMAP1Q9NPF5 467 aaPredicted RBP19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TRPV5Q9NQA5 729 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TDP1Q9NUW8 608 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 TRPM5Q9NZQ8 1165 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 PIAS3Q9Y6X2 628 aa19.55■□□□□ 0.72
COL1A1-206ENST00000485870 SOBPA7XYQ1 873 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 CILPO75339 1184 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 CKMP06732 381 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 GLULP15104 373 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 ADORA2BP29275 332 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 NUP93Q8N1F7 819 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 ARL14EPQ8N8R7 260 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-206ENST00000485870 TATDN2Q93075 761 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 ARID3AQ99856 593 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 CLSTN2Q9H4D0 955 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 KIF9Q9HAQ2 790 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 FAM86C1Q9NVL1 165 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 THG1LQ9NWX6 298 aaKnown RBP19.54■□□□□ 0.72
COL1A1-206ENST00000485870 DLGAP2Q9P1A6 1054 aa19.54■□□□□ 0.72
COL1A1-206ENST00000485870 SHISA7A6NL88 538 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 ABL1P00519 1130 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 USP17L7P0C7H9 530 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 TARSP26639 723 aaKnown RBP19.53■□□□□ 0.72
COL1A1-206ENST00000485870 SOX9P48436 509 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 KPNA1P52294 538 aaPredicted RBP19.53■□□□□ 0.72
COL1A1-206ENST00000485870 MAP3K7CLP57077 242 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 TAF10Q12962 218 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 ZNF394Q53GI3 561 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 FOXR2Q6PJQ5 311 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 RIN3Q8TB24 985 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 WHAMMQ8TF30 809 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 SMOQ99835 787 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 CISHQ9NSE2 258 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 GCNT4Q9P109 453 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 NDRG2Q9UN36 371 aaKnown RBP19.53■□□□□ 0.72
COL1A1-206ENST00000485870 MRPS17Q9Y2R5 130 aaKnown RBP19.53■□□□□ 0.72
COL1A1-206ENST00000485870 COQ4Q9Y3A0 265 aa19.53■□□□□ 0.72
COL1A1-206ENST00000485870 MAN2B1O00754 1011 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 BEST1O76090 585 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 RTN3O95197 1032 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-206ENST00000485870 FAM200BP0CF97 657 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 HDCP19113 662 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 YWHAQP27348 245 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 FMO5P49326 533 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 SLC5A3P53794 718 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 PLCB2Q00722 1185 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 TNK2Q07912 1038 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 LRMPQ12912 555 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 ZNF268Q14587 947 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-206ENST00000485870 CLEC17AQ6ZS10 378 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 ZMIZ2Q8NF64 920 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 SCAMP5Q8TAC9 235 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 FAM3CQ92520 227 aa19.52■□□□□ 0.72
COL1A1-206ENST00000485870 ATOH1Q92858 354 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms