RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MRPS23Q9Y3D9 190 aaKnown RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 VWA8A3KMH1 1905 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 MTCL1Q9Y4B5 1905 aaKnown RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 RHOP08100 348 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 SETSIPP0DME0 302 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 NPR3P17342 541 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 PFKLP17858 780 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 ACO1P21399 889 aaKnown RBP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 DDX6P26196 483 aaKnown RBP eCLIP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 GNA15P30679 374 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 BCAT1P54687 386 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 POLR2FP61218 127 aaKnown RBP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 ZXDAP98168 799 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 RBM10P98175 930 aaKnown RBP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 TRIM14Q14142 442 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 DRAP1Q14919 205 aaPredicted RBP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 NR1I3Q14994 352 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 MEA1Q16626 185 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 IER5LQ5T953 404 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 SCARA3Q6AZY7 606 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 PPP1R2P3Q6NXS1 205 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 LCLAT1Q6UWP7 414 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 DENND5BQ6ZUT9 1274 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 GRASPQ7Z6J2 395 aaPredicted RBP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 FAM35AQ86V20 835 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 ARHGEF19Q8IW93 802 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 FUKQ8N0W3 1084 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 ARHGAP18Q8N392 663 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 FBXL6Q8N531 539 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 C12orf29Q8N999 325 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 SLC4A11Q8NBS3 891 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 RNF214Q8ND24 703 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 SHC3Q92529 594 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 SUSD6Q92537 303 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 MRPS31Q92665 395 aaKnown RBP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 NXPE3Q969Y0 559 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 E2F7Q96AV8 911 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 TRMT2BQ96GJ1 504 aaKnown RBP8.75□□□□□ -1.01
SF3A1-208ENST00000485618 PRRX2Q99811 253 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 ARID3AQ99856 593 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 TRIM62Q9BVG3 475 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 APOL5Q9BWW9 433 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 HSD3B7Q9H2F3 369 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 CSNK1G1Q9HCP0 422 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 KRT82Q9NSB4 513 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 FAM49BQ9NUQ9 324 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 TMLHEQ9NVH6 421 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 TRPM5Q9NZQ8 1165 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 CEP72Q9P209 647 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 ZNF318Q5VUA4 2279 aa8.75□□□□□ -1.01
SF3A1-208ENST00000485618 TECTAO75443 2155 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 SLC38A8A6NNN8 435 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 F8VP50 259 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 FOXN3O00409 490 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 SART1O43290 800 aaKnown RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 THAP12O43422 761 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 LRRN2O75325 713 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 NOL4O94818 638 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 MYL4P12829 197 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 SP100P23497 879 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 YWHAQP27348 245 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 ADORA2BP29275 332 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 ACADSBP45954 432 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 PSEN1P49768 467 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 MAP3K7CLP57077 242 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 SIGLEC14Q08ET2 396 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 BST2Q10589 180 aaKnown RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 DDR2Q16832 855 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 FIGNQ5HY92 759 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 VPS36Q86VN1 386 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 ZNF677Q86XU0 584 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 FAM71AQ8IYT1 594 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 TDRD5Q8NAT2 981 aaKnown RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 WHAMMQ8TF30 809 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 GIPC2Q8TF65 315 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 OVCA2Q8WZ82 227 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 GOLGA1Q92805 767 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 ELMO3Q96BJ8 720 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 ZNF707Q96C28 371 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 MYRFLQ96LU7 910 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 KREMEN1Q96MU8 473 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 CDK5RAP1Q96SZ6 601 aaKnown RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 TRIM5Q9C035 493 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 ZNF518BQ9C0D4 1074 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 SLITRK6Q9H5Y7 841 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 LRRC4Q9HBW1 653 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 ZNHIT6Q9NWK9 470 aaKnown RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 IFNKQ9P0W0 207 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 MAGED2Q9UNF1 606 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 SIK3Q9Y2K2 1263 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 BZW2Q9Y6E2 419 aaKnown RBP8.74□□□□□ -1.01
SF3A1-208ENST00000485618 KMT2EQ8IZD2 1858 aa8.74□□□□□ -1.01
SF3A1-208ENST00000485618 GOLGA6L6A8MZA4 724 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 CLDN5O00501 218 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 XPO1O14980 1071 aaKnown RBP8.73□□□□□ -1.01
SF3A1-208ENST00000485618 CYP26A1O43174 497 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 FBXO21O94952 628 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 CCDC130P13994 396 aa8.73□□□□□ -1.01
SF3A1-208ENST00000485618 FERP16591 822 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms