RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 NUP93Q8N1F7 819 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 AOPEPQ8N6M6 819 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ST13P5Q8NFI4 369 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 FGF14Q92915 247 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 SMARCD2Q92925 531 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 E2F7Q96AV8 911 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TRMT2BQ96GJ1 504 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 KXD1Q9BQD3 176 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 LRFN3Q9BTN0 628 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TRPC7Q9HCX4 862 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 UBE2TQ9NPD8 197 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TAB2Q9NYJ8 693 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TRPM5Q9NZQ8 1165 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 HESX1Q9UBX0 185 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 DUSP12Q9UNI6 340 aa12.43□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TMEM221A6NGB7 291 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PRR33A8MZF0 331 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 M0R296 226 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 HMGA1P17096 107 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 RFX1P22670 979 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PPP3CCP48454 512 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PDE6CP51160 858 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 RAD23BP54727 409 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 FAM78AQ5JUQ0 283 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 GAREM2Q75VX8 874 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ARHGEF19Q8IW93 802 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PDZD8Q8NEN9 1154 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 WHAMMQ8TF30 809 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ASIC4Q96FT7 647 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 MYRFLQ96LU7 910 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PCMTD1Q96MG8 357 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 KCNK16Q96T55 309 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 HNRNPABQ99729 332 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TASP1Q9H6P5 420 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 FANCLQ9NW38 375 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 APEX2Q9UBZ4 518 aa12.42□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TRAV19A0A0A6YYK7 116 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 NARSO43776 548 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 OBSL1O75147 1896 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ECI2O75521 394 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 CKMP06732 381 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PAEPP09466 180 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 VDRP11473 427 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 NPR3P17342 541 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 FCARP24071 287 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 YWHAQP27348 245 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 USP8P40818 1118 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ZNF165P49910 485 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 SLC5A3P53794 718 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 CACNA2D1P54289 1103 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ARHGAP44Q17R89 818 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 GOLGA7BQ2TAP0 167 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 STXBP5Q5T5C0 1151 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PPP1R26Q5T8A7 1209 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 SLC44A3Q8N4M1 653 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 SLC4A11Q8NBS3 891 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TTC16Q8NEE8 873 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 LMO3Q8TAP4 145 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 FBXO32Q969P5 355 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ELSPBP1Q96BH3 223 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ASB16Q96NS5 453 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 RPP25Q9BUL9 199 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 NACA2Q9H009 215 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 VPS16Q9H269 839 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 MFSD1Q9H3U5 465 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 FBXO44Q9H4M3 255 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 KIAA1257Q9ULG3 409 aa12.41□□□□□ -0.42
CDK5RAP2-217ENST00000484546 NUP210Q8TEM1 1887 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 F11P03951 625 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 CFHP08603 1231 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 USP17L7P0C7H9 530 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 SRFP11831 508 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 SLC9A1P19634 815 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PON1P27169 355 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 BCAT1P54687 386 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PFKPQ01813 784 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TAF10Q12962 218 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 KRT31Q15323 416 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 STILQ15468 1287 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 CDKAL1Q5VV42 579 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PHLDB3Q6NSJ2 640 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 HFE2Q6ZVN8 426 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 PAQR9Q6ZVX9 377 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ARID3BQ8IVW6 561 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 CMTM8Q8IZV2 173 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 KAT5Q92993 513 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 ZSWIM3Q96MP5 696 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 SMOQ99835 787 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 BPIFA3Q9BQP9 254 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 TRMT61BQ9BVS5 477 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 DUSP16Q9BY84 665 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 BRD9Q9H8M2 597 aa12.4□□□□□ -0.42
CDK5RAP2-217ENST00000484546 THG1LQ9NWX6 298 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms