RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MED10Q9BTT4 135 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 TTLL2Q9BWV7 592 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 OSBPL6Q9BZF3 934 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 IMPG2Q9BZV3 1241 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 IRF2BPLQ9H1B7 796 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 TRPC7Q9HCX4 862 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 TDP1Q9NUW8 608 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 PIAS3Q9Y6X2 628 aa13.72□□□□□ -0.21
HDAC1-209ENST00000484305 C2orf78A6NCI8 922 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 PPP1R3GB7ZBB8 358 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 BIN1O00499 593 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 MAN2B1O00754 1011 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 PSMA7O14818 248 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 SLC16A3O15427 465 aaKnown RBP13.71□□□□□ -0.21
HDAC1-209ENST00000484305 CCDC130P13994 396 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 SOX9P48436 509 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 MXI1P50539 228 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 UBE2HP62256 183 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 TNK2Q07912 1038 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 FZD5Q13467 585 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 STIM1Q13586 685 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 MORC3Q14149 939 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 TCERG1LQ5VWI1 586 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 FAM35AQ86V20 835 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 UNC93AQ86WB7 457 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 FUKQ8N0W3 1084 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 ZNF687Q8N1G0 1237 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 C12orf29Q8N999 325 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 FBXL13Q8NEE6 735 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 RIN3Q8TB24 985 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 TWNKQ96RR1 684 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 NELL2Q99435 816 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 DUSP9Q99956 384 aaKnown RBP13.71□□□□□ -0.21
HDAC1-209ENST00000484305 NIF3L1Q9GZT8 377 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 GTSE1Q9NYZ3 720 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 GCNT4Q9P109 453 aa13.71□□□□□ -0.21
HDAC1-209ENST00000484305 NDRG2Q9UN36 371 aaKnown RBP13.71□□□□□ -0.21
HDAC1-209ENST00000484305 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
HDAC1-209ENST00000484305 STX10O60499 249 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 USP17L7P0C7H9 530 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 ANP32AP39687 249 aaKnown RBP13.7□□□□□ -0.22
HDAC1-209ENST00000484305 MRE11P49959 708 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-209ENST00000484305 INCA1Q0VD86 236 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 IFRD2Q12894 506 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-209ENST00000484305 TAF10Q12962 218 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 DCAF17Q5H9S7 520 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-209ENST00000484305 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 C1orf210Q8IVY1 113 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 ARL14EPQ8N8R7 260 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-209ENST00000484305 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 SLC2A14Q8TDB8 520 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 WHAMMQ8TF30 809 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 FAM3CQ92520 227 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 CLDN23Q96B33 292 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 KIF9Q9HAQ2 790 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 CYP3A43Q9HB55 503 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 GKN1Q9NS71 199 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 KRT82Q9NSB4 513 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 FAM49BQ9NUQ9 324 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 THG1LQ9NWX6 298 aaKnown RBP13.7□□□□□ -0.22
HDAC1-209ENST00000484305 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 PIEZO1Q92508 2521 aa13.7□□□□□ -0.22
HDAC1-209ENST00000484305 ATP8B3O60423 1300 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 TRAV19A0A0A6YYK7 116 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 AP1G2O75843 785 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 BEST1O76090 585 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 CD58P19256 250 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 PPP1R2P41236 205 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 MLLT6P55198 1093 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-209ENST00000484305 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 ZNF268Q14587 947 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-209ENST00000484305 CAMK4Q16566 473 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 TRIM68Q6AZZ1 485 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 TTI2Q6NXR4 508 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 NUP93Q8N1F7 819 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 ZMIZ2Q8NF64 920 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 SCAMP5Q8TAC9 235 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 NELFBQ8WX92 580 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 TATDN2Q93075 761 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 SLC35C1Q96A29 364 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 SMARCD1Q96GM5 515 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 SMOQ99835 787 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 FAM83CQ9BQN1 747 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 NT5C1AQ9BXI3 368 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 C8orf33Q9H7E9 229 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-209ENST00000484305 DMAP1Q9NPF5 467 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-209ENST00000484305 EHD2Q9NZN4 543 aa13.69□□□□□ -0.22
HDAC1-209ENST00000484305 ARMCX3Q9UH62 379 aaPredicted RBP13.69□□□□□ -0.22
HDAC1-209ENST00000484305 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 OTOL1A6NHN0 477 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-209ENST00000484305 SPECC1L-ADORA2AF8WAN1 911 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 TNFRSF10BO14763 440 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 NCAM2O15394 837 aa13.68□□□□□ -0.22
HDAC1-209ENST00000484305 CILPO75339 1184 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms