RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TRIM49BA6NDI0 452 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 ARNTLO00327 626 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 RTN3O95197 1032 aaPredicted RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 CKMP06732 381 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 TARSP26639 723 aaKnown RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 PPP3CCP48454 512 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 PMS1P54277 932 aaKnown RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 DCAF17Q5H9S7 520 aaPredicted RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 WDR44Q5JSH3 913 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 KLHL10Q6JEL2 608 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 CC2D1AQ6P1N0 951 aaPredicted RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 CRYBG2Q8N1P7 616 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 USP13Q92995 863 aaPredicted RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 SMARCD1Q96GM5 515 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 SLITRK1Q96PX8 696 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 APOBEC3GQ9HC16 384 aaKnown RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 METTL14Q9HCE5 456 aaKnown RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 DMAP1Q9NPF5 467 aaPredicted RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 FAM86C1Q9NVL1 165 aa14.75□□□□□ -0.05
VARS-225ENST00000482996 ARMCX3Q9UH62 379 aaPredicted RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 NDRG2Q9UN36 371 aaKnown RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 ZFHX2Q9C0A1 2572 aaPredicted RBP14.75□□□□□ -0.05
VARS-225ENST00000482996 PTPRDP23468 1912 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 BICDL2A1A5D9 508 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 LRRN2O75325 713 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 AP1G2O75843 785 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 PFKLP17858 780 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
VARS-225ENST00000482996 USP46P62068 366 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 INCA1Q0VD86 236 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 MORC3Q14149 939 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 C1orf210Q8IVY1 113 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 NUP93Q8N1F7 819 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 TTC39CQ8N584 583 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 FAM3CQ92520 227 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 FAXDC2Q96IV6 333 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 ZFYVE19Q96K21 471 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 CEP63Q96MT8 703 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 NT5C1AQ9BXI3 368 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 RAB20Q9NX57 234 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 CCL26Q9Y258 94 aa14.74□□□□□ -0.05
VARS-225ENST00000482996 MTF2Q9Y483 593 aaPredicted RBP14.74□□□□□ -0.05
VARS-225ENST00000482996 ZNF638Q14966 1978 aaKnown RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 MIA3Q5JRA6 1907 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 DENND4CQ5VZ89 1909 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 BIN1O00499 593 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 CCDC130P13994 396 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 HDCP19113 662 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 CD58P19256 250 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 YWHAQP27348 245 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 RPS9P46781 194 aaKnown RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 MRE11P49959 708 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 CACNA2D1P54289 1103 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 IFRD2Q12894 506 aaPredicted RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 TAF10Q12962 218 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 ORC1Q13415 861 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 ITPRIPL2Q3MIP1 535 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 CCDC40Q4G0X9 1142 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 FOXR2Q6PJQ5 311 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 FILIP1Q7Z7B0 1213 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 ALYREFQ86V81 257 aaKnown RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 RALGPS2Q86X27 583 aaPredicted RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 FUKQ8N0W3 1084 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 ARL14EPQ8N8R7 260 aaPredicted RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 PDZD8Q8NEN9 1154 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 SLC2A14Q8TDB8 520 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 NELFBQ8WX92 580 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 FBXO32Q969P5 355 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 CLDN23Q96B33 292 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 GKN1Q9NS71 199 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 KRT82Q9NSB4 513 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 FAM49BQ9NUQ9 324 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 TMEM30AQ9NV96 361 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 SPATA6Q9NWH7 488 aaPredicted RBP14.73□□□□□ -0.05
VARS-225ENST00000482996 HMGXB4Q9UGU5 601 aa14.73□□□□□ -0.05
VARS-225ENST00000482996 TICRRQ7Z2Z1 1910 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 C2orf78A6NCI8 922 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 ZNF840PA6NDX5 716 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 PPP1R3GB7ZBB8 358 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 SPECC1L-ADORA2AF8WAN1 911 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 LAMTOR5O43504 91 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 CILPO75339 1184 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 ABL1P00519 1130 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 FAM200BP0CF97 657 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 PDGFRLQ15198 375 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 PAQR9Q6ZVX9 377 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 FRMD5Q7Z6J6 570 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 C12orf29Q8N999 325 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 TRIML1Q8N9V2 468 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 TTC16Q8NEE8 873 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 TTC8Q8TAM2 541 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 OVCA2Q8WZ82 227 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 SEMA4DQ92854 862 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 SLC22A12Q96S37 553 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 CYP2S1Q96SQ9 504 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 KCNK16Q96T55 309 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 PHOX2BQ99453 314 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 FAM83CQ9BQN1 747 aa14.72□□□□□ -0.05
VARS-225ENST00000482996 FAM124BQ9H5Z6 455 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms