RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 DNAI2Q9GZS0 605 aa21.4■■□□□ 1.02
VPS36-204ENST00000480923 KRT82Q9NSB4 513 aa21.4■■□□□ 1.02
VPS36-204ENST00000480923 TRPM5Q9NZQ8 1165 aa21.4■■□□□ 1.02
VPS36-204ENST00000480923 KMT2EQ8IZD2 1858 aa21.4■■□□□ 1.02
VPS36-204ENST00000480923 ZDBF2Q9HCK1 2354 aa21.39■■□□□ 1.02
VPS36-204ENST00000480923 ZNF318Q5VUA4 2279 aa21.39■■□□□ 1.02
VPS36-204ENST00000480923 AP1G2O75843 785 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 DCNP07585 359 aaKnown RBP21.39■■□□□ 1.01
VPS36-204ENST00000480923 CD72P21854 359 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 FOXR2Q6PJQ5 311 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 FUKQ8N0W3 1084 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 C12orf29Q8N999 325 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 PJA1Q8NG27 643 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 SLC2A14Q8TDB8 520 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 KCNK16Q96T55 309 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 DDX23Q9BUQ8 820 aaKnown RBP21.39■■□□□ 1.01
VPS36-204ENST00000480923 TTLL2Q9BWV7 592 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 CLSTN2Q9H4D0 955 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 DMAP1Q9NPF5 467 aaPredicted RBP21.39■■□□□ 1.01
VPS36-204ENST00000480923 TRPV5Q9NQA5 729 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 TDP1Q9NUW8 608 aa21.39■■□□□ 1.01
VPS36-204ENST00000480923 THG1LQ9NWX6 298 aaKnown RBP21.39■■□□□ 1.01
VPS36-204ENST00000480923 TRAV19A0A0A6YYK7 116 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 CILPO75339 1184 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 ADORA2BP29275 332 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 TCF15Q12870 199 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 ARHGAP29Q52LW3 1261 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 ZNF852Q6ZMS4 543 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 CCDC105Q8IYK2 499 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 NUP93Q8N1F7 819 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 USP13Q92995 863 aaPredicted RBP21.38■■□□□ 1.01
VPS36-204ENST00000480923 TATDN2Q93075 761 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 FAXDC2Q96IV6 333 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 ZFYVE19Q96K21 471 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 KIF9Q9HAQ2 790 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 LTB4R2Q9NPC1 389 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 CCL26Q9Y258 94 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 COQ4Q9Y3A0 265 aa21.38■■□□□ 1.01
VPS36-204ENST00000480923 C2orf78A6NCI8 922 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 CKMP06732 381 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 USP17L7P0C7H9 530 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 FMO5P49326 533 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 TAF10Q12962 218 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 ZNF394Q53GI3 561 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 DTWD2Q8NBA8 298 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 TTC16Q8NEE8 873 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 WHAMMQ8TF30 809 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 SLITRK1Q96PX8 696 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 CYP2S1Q96SQ9 504 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 SRRTQ9BXP5 876 aaKnown RBP21.37■■□□□ 1.01
VPS36-204ENST00000480923 MRPS17Q9Y2R5 130 aaKnown RBP21.37■■□□□ 1.01
VPS36-204ENST00000480923 MTF2Q9Y483 593 aaPredicted RBP21.37■■□□□ 1.01
VPS36-204ENST00000480923 PIAS3Q9Y6X2 628 aa21.37■■□□□ 1.01
VPS36-204ENST00000480923 FAM170BA6NMN3 283 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 H0Y858 1186 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 GOLGA6L22H0YM25 854 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 ARNTLO00327 626 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 MAN2B1O00754 1011 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 RTN3O95197 1032 aaPredicted RBP21.36■■□□□ 1.01
VPS36-204ENST00000480923 GNA14O95837 355 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 ABL1P00519 1130 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 FAM200BP0CF97 657 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 YWHAQP27348 245 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 PPP3CCP48454 512 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 KPNA1P52294 538 aaPredicted RBP21.36■■□□□ 1.01
VPS36-204ENST00000480923 PLCB2Q00722 1185 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 NHLH1Q02575 133 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 ZNF268Q14587 947 aaPredicted RBP21.36■■□□□ 1.01
VPS36-204ENST00000480923 TTC39CQ8N584 583 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 ARL14EPQ8N8R7 260 aaPredicted RBP21.36■■□□□ 1.01
VPS36-204ENST00000480923 TTC8Q8TAM2 541 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 FBXO32Q969P5 355 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 CYFIP2Q96F07 1278 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 SLC22A12Q96S37 553 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 HNRNPABQ99729 332 aaKnown RBP21.36■■□□□ 1.01
VPS36-204ENST00000480923 SMOQ99835 787 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 ARID3AQ99856 593 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 CISHQ9NSE2 258 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 COL4A3Q01955 1670 aa21.36■■□□□ 1.01
VPS36-204ENST00000480923 ZNF840PA6NDX5 716 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 FGFR1OPO95684 399 aaKnown RBP21.35■■□□□ 1.01
VPS36-204ENST00000480923 HDCP19113 662 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 PDE6CP51160 858 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 SLC5A3P53794 718 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 MAP3K7CLP57077 242 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 LRMPQ12912 555 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 CC2D1AQ6P1N0 951 aaPredicted RBP21.35■■□□□ 1.01
VPS36-204ENST00000480923 HEXIM2Q96MH2 286 aaKnown RBP21.35■■□□□ 1.01
VPS36-204ENST00000480923 NELL2Q99435 816 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 OSBPL6Q9BZF3 934 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 NUP62CLQ9H1M0 184 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 LMBRD1Q9NUN5 540 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 GCNT4Q9P109 453 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 RWDD2AQ9UIY3 292 aa21.35■■□□□ 1.01
VPS36-204ENST00000480923 BEST1O76090 585 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 TARSP26639 723 aaKnown RBP21.34■■□□□ 1.01
VPS36-204ENST00000480923 CETN1Q12798 172 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 CUL2Q13617 745 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 MLKLQ8NB16 471 aa21.34■■□□□ 1.01
VPS36-204ENST00000480923 PDZD8Q8NEN9 1154 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms