RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TRIOBPQ9H2D6 2365 aa5.79□□□□□ -1.48
VPS50-214ENST00000477935 CCDC88AQ3V6T2 1871 aa5.79□□□□□ -1.48
VPS50-214ENST00000477935 TONSLQ96HA7 1378 aa5.79□□□□□ -1.48
VPS50-214ENST00000477935 SOS1Q07889 1333 aaPredicted RBP5.78□□□□□ -1.48
VPS50-214ENST00000477935 MKI67P46013 3256 aaKnown RBP5.78□□□□□ -1.48
VPS50-214ENST00000477935 OFD1O75665 1012 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 ITGAMP11215 1152 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 PRDX5P30044 214 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 CYP2C19P33261 490 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 EPS15P42566 896 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 TAP1Q03518 808 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 RRS1Q15050 365 aaKnown RBP5.78□□□□□ -1.48
VPS50-214ENST00000477935 HEATR3Q7Z4Q2 680 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 GPR149Q86SP6 731 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 AOPEPQ8N6M6 819 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 Q8NA96 180 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 MAP3K14Q99558 947 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 C1orf43Q9BWL3 253 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 IMPG2Q9BZV3 1241 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 WDCPQ9H6R7 721 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 KMT5AQ9NQR1 393 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 SYBUQ9NX95 663 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 VSX1Q9NZR4 365 aaPredicted RBP5.78□□□□□ -1.48
VPS50-214ENST00000477935 ZIM2Q9NZV7 527 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 FEZ2Q9UHY8 353 aaPredicted RBP5.78□□□□□ -1.48
VPS50-214ENST00000477935 DMRT1Q9Y5R6 373 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 ITGB4P16144 1822 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 ZNF831Q5JPB2 1677 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 FLT4P35916 1363 aa5.78□□□□□ -1.48
VPS50-214ENST00000477935 MYADML2A6NDP7 307 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 NPHP1O15259 732 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 ANXA1P04083 346 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 GNAI3P08754 354 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 ALDH1B1P30837 517 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 PIK3CGP48736 1102 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 USP14P54578 494 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 GNAI1P63096 354 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 ZNF267Q14586 743 aaPredicted RBP5.77□□□□□ -1.49
VPS50-214ENST00000477935 ATAT1Q5SQI0 421 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 IFIT1BQ5T764 474 aaKnown RBP5.77□□□□□ -1.49
VPS50-214ENST00000477935 PRR5LQ6MZQ0 368 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 FAM90A1Q86YD7 464 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 PDSS2Q86YH6 399 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 TPH2Q8IWU9 490 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 GRAMD1CQ8IYS0 662 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 PDPRQ8NCN5 879 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 AIFM3Q96NN9 605 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 PSMD1Q99460 953 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 AGAP2Q99490 1192 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 TOR3AQ9H497 397 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 BRD9Q9H8M2 597 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 UNKLQ9H9P5 680 aaKnown RBP5.77□□□□□ -1.49
VPS50-214ENST00000477935 LMBRD1Q9NUN5 540 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 RLIMQ9NVW2 624 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 PACSIN3Q9UKS6 424 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 ADAMTS7Q9UKP4 1686 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 A0A1W2PP64 1363 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 FER1L6Q2WGJ9 1857 aa5.77□□□□□ -1.49
VPS50-214ENST00000477935 COL6A3P12111 3177 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 PRSS29PA6NIE9 313 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 RFPL1O75677 317 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 S100BP04271 92 aaPredicted RBP5.76□□□□□ -1.49
VPS50-214ENST00000477935 HKR1P10072 659 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 TYRP14679 529 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 NPR1P16066 1061 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 FDXRP22570 491 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 TGM1P22735 817 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 AVPR1BP47901 424 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 VAV2P52735 878 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 PSMC1P62191 440 aaKnown RBP5.76□□□□□ -1.49
VPS50-214ENST00000477935 BLOC1S1P78537 153 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 ZNF844Q08AG5 666 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 GEN1Q17RS7 908 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 HECTD2Q5U5R9 776 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 RAVER1Q8IY67 606 aaKnown RBP5.76□□□□□ -1.49
VPS50-214ENST00000477935 COLGALT2Q8IYK4 626 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 CFAP52Q8N1V2 620 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 SUPT20HQ8NEM7 779 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 FAM167AQ96KS9 214 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 COQ10AQ96MF6 247 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 MRPL46Q9H2W6 279 aaKnown RBP5.76□□□□□ -1.49
VPS50-214ENST00000477935 SLAMF7Q9NQ25 335 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 TBCCD1Q9NVR7 557 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 CTTNBP2NLQ9P2B4 639 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 CFAP97Q9P2B7 532 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 TESQ9UGI8 421 aaKnown RBP5.76□□□□□ -1.49
VPS50-214ENST00000477935 NR2E3Q9Y5X4 410 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 EPN1Q9Y6I3 576 aaPredicted RBP5.76□□□□□ -1.49
VPS50-214ENST00000477935 CEP290O15078 2479 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 MON2Q7Z3U7 1717 aa5.76□□□□□ -1.49
VPS50-214ENST00000477935 A0A1W2PS29 197 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 ZNF785A8K8V0 405 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 E9PLN8 166 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 AP1G1O43747 822 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 MATN4O95460 622 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 ALDH2P05091 517 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 GJB1P08034 283 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 CYP19A1P11511 503 aaPredicted RBP5.75□□□□□ -1.49
VPS50-214ENST00000477935 KCNA2P16389 499 aa5.75□□□□□ -1.49
VPS50-214ENST00000477935 PROZP22891 400 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms