RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ZNF277Q9NRM2 450 aaPredicted RBP2.65□□□□□ -1.99
CCDC39-203ENST00000473854 MMP24Q9Y5R2 645 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 SPTLC2O15270 562 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 PDE8AO60658 829 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 KIF20AO95235 890 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 TBXAS1P24557 533 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 IL6STP40189 918 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 RRP1P56182 461 aaKnown RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 KEAP1Q14145 624 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 E2F2Q14209 437 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 KIF22Q14807 665 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 FAM160B1Q5W0V3 765 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 DENND2CQ68D51 928 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 HIST2H2BCQ6DN03 193 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 BCDIN3DQ7Z5W3 292 aaKnown RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 SPATA2LQ8IUW3 424 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 PNISRQ8TF01 805 aaKnown RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 RAB24Q969Q5 203 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 MED30Q96HR3 178 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 CLPTM1LQ96KA5 538 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 LENG8Q96PV6 779 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 CD93Q9NPY3 652 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 C14orf119Q9NWQ9 140 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-203ENST00000473854 PCDHA13Q9Y5I0 950 aa2.64□□□□□ -1.99
CCDC39-203ENST00000473854 F2RL2O00254 374 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 SMARCA1P28370 1054 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 TNFRSF8P28908 595 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 ID4P47928 161 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 PXNP49023 591 aaPredicted RBP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 ALDH7A1P49419 539 aaKnown RBP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 TOB1P50616 345 aaPredicted RBP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 B4GALNT1Q00973 533 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 TKFCQ3LXA3 575 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 TAF7LQ5H9L4 462 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 TMTC4Q5T4D3 741 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 ARHGAP40Q5TG30 622 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 SLC4A10Q6U841 1118 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 NPNTQ6UXI9 565 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 B4GALNT4Q76KP1 1039 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 NPM2Q86SE8 214 aaKnown RBP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 AMOTL1Q8IY63 956 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 C16orf71Q8IYS4 520 aaPredicted RBP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 SIRT6Q8N6T7 355 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 WFIKKN2Q8TEU8 576 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 AHCYL2Q96HN2 611 aaKnown RBP2.63□□□□□ -1.99
CCDC39-203ENST00000473854 HES6Q96HZ4 224 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 MOGAT1Q96PD6 335 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 AMFRQ9UKV5 643 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 ZDHHC8Q9ULC8 765 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 SSX2IPQ9Y2D8 614 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 CCDC180Q9P1Z9 1646 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 WASHC2AQ641Q2 1341 aa2.63□□□□□ -1.99
CCDC39-203ENST00000473854 ARIH2O95376 493 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 MT-CO3P00414 261 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 PLGP00747 810 aaPredicted RBP2.62□□□□□ -1.99
CCDC39-203ENST00000473854 PIK3CGP48736 1102 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 PDE6CP51160 858 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 PRTGQ2VWP7 1150 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 RNASE12Q5GAN4 147 aaKnown RBP2.62□□□□□ -1.99
CCDC39-203ENST00000473854 TMEM65Q6PI78 240 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 VSTM1Q6UX27 236 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 USP37Q86T82 979 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 NUDCD2Q8WVJ2 157 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 SLC25A28Q96A46 364 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 DECR2Q9NUI1 292 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 FANCLQ9NW38 375 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 ASIC5Q9NY37 505 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 WNT16Q9UBV4 365 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 EVPLQ92817 2033 aa2.62□□□□□ -1.99
CCDC39-203ENST00000473854 M0QYG6 137 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 ERC2O15083 957 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 ZNF432O94892 652 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 PLA2G2AP14555 144 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 MALP21145 153 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 ENTPD1P49961 510 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 SUMO2P61956 95 aaKnown RBP2.61□□□□□ -1.99
CCDC39-203ENST00000473854 EGR4Q05215 589 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 LARS2Q15031 903 aaKnown RBP2.61□□□□□ -1.99
CCDC39-203ENST00000473854 IQCB1Q15051 598 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 LONRF3Q496Y0 759 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 RGS7BPQ6MZT1 257 aaPredicted RBP2.61□□□□□ -1.99
CCDC39-203ENST00000473854 ZNF793Q6ZN11 406 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 TTC7BQ86TV6 843 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 SPEM1Q8N4L4 309 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 RSPRY1Q96DX4 576 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 SLC46A1Q96NT5 459 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 TUBB6Q9BUF5 446 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 MRPS18AQ9NVS2 196 aaKnown RBP2.61□□□□□ -1.99
CCDC39-203ENST00000473854 HESX1Q9UBX0 185 aa2.61□□□□□ -1.99
CCDC39-203ENST00000473854 CFAP20Q9Y6A4 193 aaKnown RBP2.61□□□□□ -1.99
CCDC39-203ENST00000473854 NOTCH2Q04721 2471 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 A0A087X0B3 334 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 CTIFO43310 598 aaKnown RBP2.6□□□□□ -1.99
CCDC39-203ENST00000473854 LDB3O75112 727 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 SOCS5O75159 536 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 USP12O75317 370 aa2.6□□□□□ -1.99
CCDC39-203ENST00000473854 CDC45O75419 566 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms