RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	CFAP221	Q4G0U5	840 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ARHGAP29	Q52LW3	1261 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	C2CD6	Q53TS8	623 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	PLPP4	Q5VZY2	271 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	TPGS2	Q68CL5	300 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	MMS22L	Q6ZRQ5	1243 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	CLEC20A	Q6ZU45	233 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	MON1B	Q7L1V2	547 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	PHLDB2	Q86SQ0	1253 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	PIGZ	Q86VD9	579 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	REXO1L1P	Q8IX06	675 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	MRPL43	Q8N983	215 aa	Known RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ZNF461	Q8TAF7	563 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	SPPL2B	Q8TCT7	592 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	IPO4	Q8TEX9	1081 aa	Known RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	STK32A	Q8WU08	396 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ATRIP	Q8WXE1	791 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ARNTL2	Q8WYA1	636 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ZNF653	Q96CK0	615 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	HSFY1	Q96LI6	401 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	CPXM1	Q96SM3	734 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	KCNK16	Q96T55	309 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	SMO	Q99835	787 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	EMILIN2	Q9BXX0	1053 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	UBXN6	Q9BZV1	441 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	TSGA10	Q9BZW7	698 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	MIS12	Q9H081	205 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	THAP2	Q9H0W7	228 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	CSNK1G1	Q9HCP0	422 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	ABCB6	Q9NP58	842 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	NGRN	Q9NPE2	291 aa	Known RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	LZTFL1	Q9NQ48	299 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	SLC27A5	Q9Y2P5	690 aa		11.12	□□□□□ -0.63
PUM1-208	ENST00000471894	TNRC18	O15417	2968 aa	Predicted RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	GOLGA6L9	A6NEM1	432 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	USP27X	A6NNY8	438 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894		F8VP50	259 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	TRIM66	O15016	1216 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	TEX28	O15482	410 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	PJA2	O43164	708 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	ABLIM3	O94929	683 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	ADH1A	P07327	375 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	HAPLN1	P10915	354 aa	Predicted RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	LCP1	P13796	627 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	KLRC2	P26717	231 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	ELF1	P32519	619 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	MAGEA11	P43364	429 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	NOP2	P46087	812 aa	Known RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	GABRB2	P47870	512 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	CACNA2D1	P54289	1103 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	NAP1L1	P55209	391 aa	Known RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	PTP4A2	Q12974	167 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	ZNF268	Q14587	947 aa	Predicted RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	MGAT5B	Q3V5L5	792 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	PTPN20	Q4JDL3	420 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	CYP4A22	Q5TCH4	519 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	OR6B2	Q6IFH4	312 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	PDE12	Q6L8Q7	609 aa	Known RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	VSTM1	Q6UX27	236 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	ZNF662	Q6ZS27	426 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	TMEM110	Q86TL2	294 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	ZMIZ2	Q8NF64	920 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	KCTD13	Q8WZ19	329 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	TIFA	Q96CG3	184 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	KLHL5	Q96PQ7	755 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	SEPT5	Q99719	369 aa	Predicted RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	SLC4A5	Q9BY07	1137 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	LACRT	Q9GZZ8	138 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	PRO3102	Q9H379	93 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	LRRC4	Q9HBW1	653 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	CYLD	Q9NQC7	956 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	KCND1	Q9NSA2	647 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	WDR35	Q9P2L0	1181 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	TRIM10	Q9UDY6	481 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	CNOT8	Q9UFF9	292 aa	Known RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	AFF4	Q9UHB7	1163 aa	Known RBP	11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	STRIP2	Q9ULQ0	834 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	GUCA1B	Q9UMX6	200 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	IRAK3	Q9Y616	596 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	DUSP10	Q9Y6W6	482 aa		11.11	□□□□□ -0.63
PUM1-208	ENST00000471894	PTPRD	P23468	1912 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	C2orf71	A6NGG8	1288 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	HIDE1	A8MVS5	230 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894		E5RJQ4	531 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	FSCN2	O14926	492 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	ATMIN	O43313	823 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	VNN2	O95498	520 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	ABL1	P00519	1130 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	ERBB2	P04626	1255 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	CYP1A2	P05177	515 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	ATF2	P15336	505 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	RRM1	P23921	792 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	ARHGAP25	P42331	645 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	TUFM	P49411	452 aa	Known RBP	11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	RPL10A	P62906	217 aa	Known RBP	11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	DDR2	Q16832	855 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	XYLT1	Q86Y38	959 aa		11.1	□□□□□ -0.63
PUM1-208	ENST00000471894	SCUBE3	Q8IX30	993 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms