RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 TMEM253P0C7T8 217 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 PRDX6P30041 224 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 SERPINB6P35237 376 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 GMPSP49915 693 aaPredicted RBP11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 FKBP1BP68106 108 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 LPCAT4Q643R3 524 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 CYP2U1Q7Z449 544 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 ITIH5Q86UX2 942 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 TXNRD3Q86VQ6 643 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 SPERTQ8NA61 448 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 SLC43A3Q8NBI5 491 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 CEP63Q96MT8 703 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 RANBP9Q96S59 729 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 PRPF18Q99633 342 aaKnown RBP11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 BARHL2Q9NY43 387 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 FBXO9Q9UK97 447 aaPredicted RBP11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 ERVK-11Q9UQG0 969 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 B3GNT3Q9Y2A9 372 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 MAD1L1Q9Y6D9 718 aa11.23□□□□□ -0.61
CHMP2B-203ENST00000471660 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 ALOX15BO15296 676 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 PRDM1O75626 825 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 APOEP02649 317 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 THRAP10827 490 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 FGFR1P11362 822 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 PLCG1P19174 1290 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 PON1P27169 355 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TM4SF4P48230 202 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 HNRNPFP52597 415 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 HADHBP55084 474 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TBCCQ15814 346 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 DCAF6Q58WW2 860 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 PPP2R2DQ66LE6 453 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 OR7G1Q8NGA0 311 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 ZC3H12CQ9C0D7 883 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 KCNK13Q9HB14 408 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 NCKIPSDQ9NZQ3 722 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 RABGAP1Q9Y3P9 1069 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TXNDC9O14530 226 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 INHBBP09529 407 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 RBP3P10745 1247 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 ACADSBP45954 432 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 CDK8P49336 464 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 FKBP3Q00688 224 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 CTTNQ14247 550 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 ARSHQ5FYA8 562 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 MFSD14BQ5SR56 506 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TTC23LQ6PF05 361 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 SYDE1Q6ZW31 735 aaPredicted RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 ADAT2Q7Z6V5 191 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TMEM126BQ8IUX1 230 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 LSMEM2Q8N112 164 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TRPM4Q8TD43 1214 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 ALG3Q92685 438 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 PSD2Q9BQI7 771 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 CEP44Q9C0F1 390 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TRABDQ9H4I3 376 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 MAN1C1Q9NR34 630 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 TBK1Q9UHD2 729 aa11.22□□□□□ -0.61
CHMP2B-203ENST00000471660 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 PP2D1A8MPX8 630 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 M0R2N6 131 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 FCHO1O14526 889 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 MCF2LO15068 1137 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 CCNT2O60583 730 aaKnown RBP11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 PLEKHA8P1O95397 391 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 C8BP07358 591 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 UBL4AP11441 157 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 RPA3P35244 121 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 CHKAP35790 457 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 PCYT1AP49585 367 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 ZBTB16Q05516 673 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 SLC1A5Q15758 541 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 KCNJ8Q15842 424 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 Q3C1V9 767 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 EFHC1Q5JVL4 640 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 RFX8Q6ZV50 586 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 ZNF276Q8N554 614 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 CPSF7Q8N684 471 aaKnown RBP11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 ESX1Q8N693 406 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 OXNAD1Q96HP4 312 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 MED30Q96HR3 178 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 PPCSQ9HAB8 311 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 C6orf50Q9HD87 102 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 CRNNQ9UBG3 495 aaPredicted RBP11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 DCTN4Q9UJW0 460 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 IFT52Q9Y366 437 aa11.21□□□□□ -0.61
CHMP2B-203ENST00000471660 TRIM64CA6NLI5 447 aa11.2□□□□□ -0.62
CHMP2B-203ENST00000471660 TBKBP1A7MCY6 615 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms