RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 STK32AQ8WU08 396 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 TOP1MTQ969P6 601 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 ZNF689Q96CS4 500 aaPredicted RBP8.78□□□□□ -1
GTF3A-206ENST00000470606 ACBD6Q9BR61 282 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 MRPL47Q9HD33 250 aaKnown RBP8.78□□□□□ -1
GTF3A-206ENST00000470606 KRT82Q9NSB4 513 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 ADAM28Q9UKQ2 775 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 CDH9Q9ULB4 789 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 LRFN2Q9ULH4 789 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 PCDHA3Q9Y5H8 950 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.78□□□□□ -1
GTF3A-206ENST00000470606 SCINQ9Y6U3 715 aa8.78□□□□□ -1
GTF3A-206ENST00000470606 GREB1Q4ZG55 1949 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 C2CD4BA6NLJ0 364 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 EFCAB8A8MWE9 144 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 SPOPO43791 374 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 CEP104O60308 925 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 SETSIPP0DME0 302 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 RAG1P15918 1043 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 TYMPP19971 482 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 CTNNA2P26232 953 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 IL1R2P27930 398 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 MAP3K7CLP57077 242 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 WDR5P61964 334 aaKnown RBP8.77□□□□□ -1.01
GTF3A-206ENST00000470606 MRPL58Q14197 206 aaKnown RBP8.77□□□□□ -1.01
GTF3A-206ENST00000470606 RTP2Q5QGT7 225 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 TEX35Q5T0J7 233 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 PPP1R2P3Q6NXS1 205 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 OTOP2Q7RTS6 562 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 HDAC7Q8WUI4 952 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 MYLPFQ96A32 169 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 RNPC3Q96LT9 517 aaKnown RBP8.77□□□□□ -1.01
GTF3A-206ENST00000470606 SELENOOQ9BVL4 669 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 MIS12Q9H081 205 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 SYNCQ9H7C4 482 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 ANKZF1Q9H8Y5 726 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 CALCOCO1Q9P1Z2 691 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 HESX1Q9UBX0 185 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 STRIP2Q9ULQ0 834 aa8.77□□□□□ -1.01
GTF3A-206ENST00000470606 CTAGE15A4D2H0 777 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CES2O00748 559 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 XPO1O14980 1071 aaKnown RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 LRCH4O75427 683 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 VNN2O95498 520 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 ALDH2P05091 517 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CTAGE8P0CG41 777 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 LCP1P13796 627 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 BDNFP23560 247 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 RFC2P35250 354 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 YWHAHQ04917 246 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 ADIGQ0VDE8 80 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 C15orf59Q2T9L4 293 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 VARS2Q5ST30 1063 aaKnown RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 FAM102AQ5T9C2 384 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 FAM171A1Q5VUB5 890 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 OR6B2Q6IFH4 312 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 DCUN1D2Q6PH85 259 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 BHLHA9Q7RTU4 235 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 ADAT2Q7Z6V5 191 aaKnown RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CTAGE6Q86UF2 777 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CTAGE4Q8IX94 777 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 TTC9BQ8N6N2 239 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CEP112Q8N8E3 955 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 NIPA2Q8N8Q9 360 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 ACTRT1Q8TDG2 376 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 ACSF2Q96CM8 615 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 FAM193BQ96PV7 902 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 PEBP4Q96S96 227 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 AP1M1Q9BXS5 423 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CARD9Q9H257 536 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CSNK1G1Q9HCP0 422 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 PRDM10Q9NQV6 1147 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 KLHL11Q9NVR0 708 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 RNF216Q9NWF9 866 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 WDR35Q9P2L0 1181 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 USTQ9Y2C2 406 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 ABHD14A-ACY1A0A1B0GW23 586 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 MIF4GDA9UHW6 222 aaKnown RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 TBC1D4O60343 1298 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 TADA2AO75478 443 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 AP1G2O75843 785 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 FGGP02679 453 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 FYNP06241 537 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 LINC00271P0C7V0 271 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 FGFR3P22607 806 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 PCSK1P29120 753 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 MAN1A1P33908 653 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 SLC1A1P43005 524 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 PGFP49763 221 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 PITX1P78337 314 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 SLC6A3Q01959 620 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 SLC25A11Q02978 314 aaKnown RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 ADCY2Q08462 1091 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CCDC14Q49A88 953 aa8.76□□□□□ -1.01
GTF3A-206ENST00000470606 CC2D1AQ6P1N0 951 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-206ENST00000470606 FUT10Q6P4F1 479 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms