RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 ELMOD1Q8N336 334 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 CMASQ8NFW8 434 aaPredicted RBP12.58□□□□□ -0.4
APTX-213ENST00000465003 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 RIPOR3Q96MK2 946 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 MYADMQ96S97 322 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
APTX-213ENST00000465003 LRRC3Q9BY71 257 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 ASAH2Q9NR71 780 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 OBSL1O75147 1896 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 M0QYV0 167 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 O00370 1275 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 THAP12O43422 761 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 MOSPD3O75425 235 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 TADA3O75528 432 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 PTPN2P17706 415 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 TRIM21P19474 475 aaKnown RBP12.58□□□□□ -0.4
APTX-213ENST00000465003 FSHRP23945 695 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 ANXA13P27216 316 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 GABRR2P28476 465 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 PGFP49763 221 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 RGS7P49802 495 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 SLC5A3P53794 718 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 VEPH1Q14D04 833 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 TEAD2Q15562 447 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 TAF3Q5VWG9 929 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 NDRG1Q92597 394 aaKnown RBP12.58□□□□□ -0.4
APTX-213ENST00000465003 FAXDC2Q96IV6 333 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 CD320Q9NPF0 282 aa12.58□□□□□ -0.4
APTX-213ENST00000465003 DMAP1Q9NPF5 467 aaPredicted RBP12.58□□□□□ -0.4
APTX-213ENST00000465003 MRPS23Q9Y3D9 190 aaKnown RBP12.58□□□□□ -0.4
APTX-213ENST00000465003 MICAL2O94851 1124 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 NPR3P17342 541 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 MAGEA11P43364 429 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 RPL10AP62906 217 aaKnown RBP12.57□□□□□ -0.4
APTX-213ENST00000465003 PDE4CQ08493 712 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 AAK1Q2M2I8 961 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 VSTM1Q6UX27 236 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 DENND5BQ6ZUT9 1274 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 TMEM150AQ86TG1 271 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 SHKBP1Q8TBC3 707 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 CPLX3Q8WVH0 158 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 MCRS1Q96EZ8 462 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 ZSWIM3Q96MP5 696 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 SMG9Q9H0W8 520 aaKnown RBP12.57□□□□□ -0.4
APTX-213ENST00000465003 ATXN3LQ9H3M9 355 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 SLITRK6Q9H5Y7 841 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 PATJQ8NI35 1801 aa12.57□□□□□ -0.4
APTX-213ENST00000465003 HHLA1C9JL84 531 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 TRIM66O15016 1216 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 ABL1P00519 1130 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 C1RP00736 705 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 ASGR2P07307 311 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 VDRP11473 427 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 MTHFRP42898 656 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 JAM2P57087 298 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 GOLGA8FQ08AF8 430 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 GOLGA8DPQ0D2H9 430 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 PRSS36Q5K4E3 855 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 DENND1BQ6P3S1 775 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 ENOSF1Q7L5Y1 443 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 NPAS3Q8IXF0 933 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 SLC20A1Q8WUM9 679 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 ZNF606Q8WXB4 792 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 RSAD2Q8WXG1 361 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 FGF13Q92913 245 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 SECISBP2LQ93073 1101 aaKnown RBP12.56□□□□□ -0.4
APTX-213ENST00000465003 PHF7Q9BWX1 381 aaPredicted RBP12.56□□□□□ -0.4
APTX-213ENST00000465003 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 TJP2Q9UDY2 1190 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.56□□□□□ -0.4
APTX-213ENST00000465003 CNTN6Q9UQ52 1028 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 PAEPP09466 180 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 ZP2Q05996 745 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 CYP4A22Q5TCH4 519 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 E4F1Q66K89 784 aaPredicted RBP12.56□□□□□ -0.4
APTX-213ENST00000465003 ARHGAP17Q68EM7 881 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 TXNDC8Q6A555 127 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 CACNA2D4Q7Z3S7 1137 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 PIGZQ86VD9 579 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 FAM71AQ8IYT1 594 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 TTC39CQ8N584 583 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 ADAMTS19Q8TE59 1207 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 SMOC2Q9H3U7 446 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
APTX-213ENST00000465003 CYTH4Q9UIA0 394 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 MAFFQ9ULX9 164 aa12.56□□□□□ -0.4
APTX-213ENST00000465003 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 C2orf78A6NCI8 922 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 TNFRSF10BO14763 440 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 CSH1P0DML2 217 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 CSH2P0DML3 217 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 PBX1P40424 430 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 TAF10Q12962 218 aa12.55□□□□□ -0.4
APTX-213ENST00000465003 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms