RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 HEXIM2Q96MH2 286 aaKnown RBP18.08■□□□□ 0.48
VPS52-215ENST00000464425 SLC46A2Q9BY10 475 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 KRT82Q9NSB4 513 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 UXTQ9UBK9 157 aaPredicted RBP18.08■□□□□ 0.48
VPS52-215ENST00000464425 AP1G2O75843 785 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 PDGFBP01127 241 aaPredicted RBP18.07■□□□□ 0.48
VPS52-215ENST00000464425 MTIF2P46199 727 aaKnown RBP18.07■□□□□ 0.48
VPS52-215ENST00000464425 IFRD2Q12894 506 aaPredicted RBP18.07■□□□□ 0.48
VPS52-215ENST00000464425 GRM2Q14416 872 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 MAN2A1Q16706 1144 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 TXNDC8Q6A555 127 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 MAB21L3Q8N8X9 362 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 EHBP1Q8NDI1 1231 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 LMO3Q8TAP4 145 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 MRPS31Q92665 395 aaKnown RBP18.07■□□□□ 0.48
VPS52-215ENST00000464425 CYFIP2Q96F07 1278 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 TRMT2BQ96GJ1 504 aaKnown RBP18.07■□□□□ 0.48
VPS52-215ENST00000464425 SMARCD1Q96GM5 515 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 NT5C1BQ96P26 610 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 TUBGCP2Q9BSJ2 902 aa18.07■□□□□ 0.48
VPS52-215ENST00000464425 SMG9Q9H0W8 520 aaKnown RBP18.07■□□□□ 0.48
VPS52-215ENST00000464425 HEPACAM2A8MVW5 462 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 TADA3O75528 432 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 BEST1O76090 585 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 RAD23BP54727 409 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 MAP3K7CLP57077 242 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 VITQ6UXI7 678 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 SIX5Q8N196 739 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 SLC4A11Q8NBS3 891 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 RSPRY1Q96DX4 576 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 TMEM176AQ96HP8 235 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 CEP295NLQ96MC4 621 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 HNRNPABQ99729 332 aaKnown RBP18.06■□□□□ 0.48
VPS52-215ENST00000464425 SMOQ99835 787 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 DNAI2Q9GZS0 605 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 TRPV4Q9HBA0 871 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 TRPC7Q9HCX4 862 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 DMAP1Q9NPF5 467 aaPredicted RBP18.06■□□□□ 0.48
VPS52-215ENST00000464425 LIMA1Q9UHB6 759 aaKnown RBP18.06■□□□□ 0.48
VPS52-215ENST00000464425 CA14Q9ULX7 337 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 PTPRDP23468 1912 aa18.06■□□□□ 0.48
VPS52-215ENST00000464425 CDK11BP21127 795 aaKnown RBP18.05■□□□□ 0.48
VPS52-215ENST00000464425 TBXAS1P24557 533 aaPredicted RBP18.05■□□□□ 0.48
VPS52-215ENST00000464425 MIIPQ5JXC2 388 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 RRAGAQ7L523 313 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 LUZP1Q86V48 1076 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 NUP93Q8N1F7 819 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 PPM1KQ8N3J5 372 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 ANKRD20A12PQ8NF67 263 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 KAT5Q92993 513 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 CRACR2AQ9BSW2 395 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 TRMT61BQ9BVS5 477 aaKnown RBP18.05■□□□□ 0.48
VPS52-215ENST00000464425 INTS2Q9H0H0 1204 aaKnown RBP18.05■□□□□ 0.48
VPS52-215ENST00000464425 SLC2A4RGQ9NR83 387 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 WNT16Q9UBV4 365 aa18.05■□□□□ 0.48
VPS52-215ENST00000464425 NCANO14594 1321 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 GTPBP10A4D1E9 387 aaKnown RBP18.04■□□□□ 0.48
VPS52-215ENST00000464425 DPYSL4O14531 572 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 PRAMEF12O95522 483 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 ABL1P00519 1130 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 FAM200BP0CF97 657 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 PSMC3P17980 439 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 YWHAEP62258 255 aaKnown RBP18.04■□□□□ 0.48
VPS52-215ENST00000464425 TPM4P67936 248 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 TAF10Q12962 218 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 KRT31Q15323 416 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 VWA3BQ502W6 1294 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 PPP1R26Q5T8A7 1209 aaPredicted RBP18.04■□□□□ 0.48
VPS52-215ENST00000464425 IER5LQ5T953 404 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 BMP8AQ7Z5Y6 402 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 MON1AQ86VX9 555 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 ARHGEF19Q8IW93 802 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 CMTM8Q8IZV2 173 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 ZMIZ2Q8NF64 920 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 SCAMP5Q8TAC9 235 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 JAKMIP2Q96AA8 810 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 LRRC3BQ96PB8 259 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 CYP2S1Q96SQ9 504 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 TTLL2Q9BWV7 592 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 NDST4Q9H3R1 872 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 MFSD1Q9H3U5 465 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 EHD2Q9NZN4 543 aa18.04■□□□□ 0.48
VPS52-215ENST00000464425 KRBA1A5PL33 1030 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 GOLGA6L19H0YKK7 550 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 TPM2P07951 284 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 DDX6P26196 483 aaKnown RBP eCLIP18.03■□□□□ 0.48
VPS52-215ENST00000464425 YWHAQP27348 245 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 GDI1P31150 447 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 AVPR1AP37288 418 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 SLC5A3P53794 718 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 MFSD6LQ8IWD5 586 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 E2F7Q96AV8 911 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 SLC22A12Q96S37 553 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 FAM124BQ9H5Z6 455 aaPredicted RBP18.03■□□□□ 0.48
VPS52-215ENST00000464425 BRD9Q9H8M2 597 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 TRPM5Q9NZQ8 1165 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 GCNT4Q9P109 453 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 PCDHB4Q9Y5E5 795 aa18.03■□□□□ 0.48
VPS52-215ENST00000464425 C2orf78A6NCI8 922 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms