RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 FAM200BP0CF97 657 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 PDE6CP51160 858 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 CLCN5P51795 746 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 VCPP55072 806 aaKnown RBP21.75■■□□□ 1.07
SCAF8-204ENST00000461219 LRMPQ12912 555 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 SLC44A4Q53GD3 710 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 NUP93Q8N1F7 819 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 CRYBG2Q8N1P7 616 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 CELF5Q8N6W0 485 aaKnown RBP21.75■■□□□ 1.07
SCAF8-204ENST00000461219 DNASE1L2Q92874 299 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 HEXIM2Q96MH2 286 aaKnown RBP21.75■■□□□ 1.07
SCAF8-204ENST00000461219 PRRX2Q99811 253 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 SLC46A2Q9BY10 475 aa21.75■■□□□ 1.07
SCAF8-204ENST00000461219 PATJQ8NI35 1801 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 CILPO75339 1184 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 PPP3CCP48454 512 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 MCCD1P59942 119 aaPredicted RBP21.74■■□□□ 1.07
SCAF8-204ENST00000461219 PRKCQQ04759 706 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 CC2D1AQ6P1N0 951 aaPredicted RBP21.74■■□□□ 1.07
SCAF8-204ENST00000461219 MON1AQ86VX9 555 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 C12orf29Q8N999 325 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 BPIFB1Q8TDL5 484 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 TATDN2Q93075 761 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 CYFIP2Q96F07 1278 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 NT5C1BQ96P26 610 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 SMG9Q9H0W8 520 aaKnown RBP21.74■■□□□ 1.07
SCAF8-204ENST00000461219 CISHQ9NSE2 258 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 OBP2AQ9NY56 170 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 COQ4Q9Y3A0 265 aa21.74■■□□□ 1.07
SCAF8-204ENST00000461219 SOBPA7XYQ1 873 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 AFPP02771 609 aaKnown RBP21.73■■□□□ 1.07
SCAF8-204ENST00000461219 USP17L7P0C7H9 530 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 TBXAS1P24557 533 aaPredicted RBP21.73■■□□□ 1.07
SCAF8-204ENST00000461219 YWHAQP27348 245 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 CACNA2D1P54289 1103 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 MAP3K7CLP57077 242 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 KCNH2Q12809 1159 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 UBXN2BQ14CS0 331 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 ARHGAP29Q52LW3 1261 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 TPRG1Q6ZUI0 275 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 TMEM150AQ86TG1 271 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 FUKQ8N0W3 1084 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 FBXO32Q969P5 355 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 JAKMIP2Q96AA8 810 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 KCNK16Q96T55 309 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 KCNH6Q9H252 994 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 KIF9Q9HAQ2 790 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 HEBP1Q9NRV9 189 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 TDP1Q9NUW8 608 aa21.73■■□□□ 1.07
SCAF8-204ENST00000461219 CHADO15335 359 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 PRAMEF12O95522 483 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 AOC1P19801 751 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 WEE1P30291 646 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 MTIF2P46199 727 aaKnown RBP21.72■■□□□ 1.07
SCAF8-204ENST00000461219 KPNA1P52294 538 aaPredicted RBP21.72■■□□□ 1.07
SCAF8-204ENST00000461219 SLC8A3P57103 927 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 USP46P62068 366 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 TAF10Q12962 218 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 CUL2Q13617 745 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 FAM114A1Q8IWE2 563 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 PDZD8Q8NEN9 1154 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 CNOT6LQ96LI5 555 aaKnown RBP21.72■■□□□ 1.07
SCAF8-204ENST00000461219 TWNKQ96RR1 684 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 FAM124BQ9H5Z6 455 aaPredicted RBP21.72■■□□□ 1.07
SCAF8-204ENST00000461219 MRPS17Q9Y2R5 130 aaKnown RBP21.72■■□□□ 1.07
SCAF8-204ENST00000461219 SIT1Q9Y3P8 196 aa21.72■■□□□ 1.07
SCAF8-204ENST00000461219 P4HA2O15460 535 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 MBD3O95983 291 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 HDCP19113 662 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 PLCB2Q00722 1185 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 CWF19L1Q69YN2 538 aaKnown RBP21.71■■□□□ 1.07
SCAF8-204ENST00000461219 PHLDB3Q6NSJ2 640 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 TRIM59Q8IWR1 403 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 PPM1KQ8N3J5 372 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 TMEM105Q8N8V8 129 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 TMEM176AQ96HP8 235 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 HNRNPABQ99729 332 aaKnown RBP21.71■■□□□ 1.07
SCAF8-204ENST00000461219 ARID3AQ99856 593 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 TTLL2Q9BWV7 592 aa21.71■■□□□ 1.07
SCAF8-204ENST00000461219 KANSL1LA0AUZ9 987 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 TADA3O75528 432 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 NPR3P17342 541 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 SLC5A3P53794 718 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 MARSP56192 900 aaKnown RBP21.7■■□□□ 1.06
SCAF8-204ENST00000461219 STARD6P59095 220 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 DPCR1Q3MIW9 517 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 ZNF852Q6ZMS4 543 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 PAQR9Q6ZVX9 377 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 ARL14EPQ8N8R7 260 aaPredicted RBP21.7■■□□□ 1.06
SCAF8-204ENST00000461219 RSPRY1Q96DX4 576 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 FOXQ1Q9C009 403 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 NACA2Q9H009 215 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 FBXO44Q9H4M3 255 aa21.7■■□□□ 1.06
SCAF8-204ENST00000461219 C2orf78A6NCI8 922 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 MAN2B1O00754 1011 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 NCAM2O15394 837 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 CD19P15391 556 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 NUBP1P53384 320 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 FCHO2Q0JRZ9 810 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 GPT2Q8TD30 523 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms