RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 C11orf16Q9NQ32 467 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 KRT82Q9NSB4 513 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 NOTCH4Q99466 2003 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 DOCK6Q96HP0 2047 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 SPTBN5Q9NRC6 3674 aaKnown RBP17.11■□□□□ 0.33
CD28-203ENST00000458610 TRAV19A0A0A6YYK7 116 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
CD28-203ENST00000458610 ZNF263O14978 683 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 NARSO43776 548 aaKnown RBP17.11■□□□□ 0.33
CD28-203ENST00000458610 LETM1O95202 739 aaPredicted RBP17.11■□□□□ 0.33
CD28-203ENST00000458610 TPM2P07951 284 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 USP17L7P0C7H9 530 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 RFX1P22670 979 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 FCARP24071 287 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 EEF1GP26641 437 aaKnown RBP17.11■□□□□ 0.33
CD28-203ENST00000458610 VIPR2P41587 438 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 RAD23BP54727 409 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 SMYD5Q6GMV2 418 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 ENOSF1Q7L5Y1 443 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 TMEM150AQ86TG1 271 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 IRF2BP1Q8IU81 584 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 FBXL6Q8N531 539 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 MAB21L3Q8N8X9 362 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 STKLD1Q8NE28 680 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 ST13P5Q8NFI4 369 aaPredicted RBP17.11■□□□□ 0.33
CD28-203ENST00000458610 LMO3Q8TAP4 145 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 OVCA2Q8WZ82 227 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 DNASE1L2Q92874 299 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 TWNKQ96RR1 684 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 KCNK16Q96T55 309 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 NAT10Q9H0A0 1025 aaKnown RBP17.11■□□□□ 0.33
CD28-203ENST00000458610 KIF9Q9HAQ2 790 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 PNPLA8Q9NP80 782 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 DOCK8Q8NF50 2099 aa17.11■□□□□ 0.33
CD28-203ENST00000458610 HEPACAM2A8MVW5 462 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 PAEPP09466 180 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 VDRP11473 427 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 MAP3K7CLP57077 242 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 PRKCQQ04759 706 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 ZNF268Q14587 947 aaPredicted RBP17.1■□□□□ 0.33
CD28-203ENST00000458610 SGO2Q562F6 1265 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 STXBP5Q5T5C0 1151 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 ARHGAP17Q68EM7 881 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 TXNDC8Q6A555 127 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 POTEHQ6S545 545 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 HFE2Q6ZVN8 426 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 SLC4A11Q8NBS3 891 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 FBXO32Q969P5 355 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 ARID3AQ99856 593 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 TUBGCP2Q9BSJ2 902 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 DUSP16Q9BY84 665 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 PLA2G2FQ9BZM2 168 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 UBXN6Q9BZV1 441 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 INTS2Q9H0H0 1204 aaKnown RBP17.1■□□□□ 0.33
CD28-203ENST00000458610 SMOC2Q9H3U7 446 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 TRPV5Q9NQA5 729 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 GCNT4Q9P109 453 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 HESX1Q9UBX0 185 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 PCDHB4Q9Y5E5 795 aa17.1■□□□□ 0.33
CD28-203ENST00000458610 KCNJ18B7U540 433 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 STK25O00506 426 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 NRG2O14511 850 aaPredicted RBP17.09■□□□□ 0.33
CD28-203ENST00000458610 CD19P15391 556 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 NPR3P17342 541 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 HDCP19113 662 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 GDI1P31150 447 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 CACNA2D1P54289 1103 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 MFAP3P55082 362 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 IFRD2Q12894 506 aaPredicted RBP17.09■□□□□ 0.33
CD28-203ENST00000458610 TAF10Q12962 218 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 KCNJ12Q14500 433 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 EXOC3L4Q17RC7 722 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 ARHGAP29Q52LW3 1261 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
CD28-203ENST00000458610 TMEM270Q6UE05 265 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 VITQ6UXI7 678 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 SIX5Q8N196 739 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 BPIFB1Q8TDL5 484 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 SMOQ99835 787 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 NDST4Q9H3R1 872 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 TRPC7Q9HCX4 862 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 TDP1Q9NUW8 608 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 IL37Q9NZH6 218 aa17.09■□□□□ 0.33
CD28-203ENST00000458610 NCANO14594 1321 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 ZNF840PA6NDX5 716 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 TNFRSF10BO14763 440 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 CHADO15335 359 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 ABL1P00519 1130 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 CKMP06732 381 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 CLCN5P51795 746 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 SLC5A3P53794 718 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 USP46P62068 366 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 FCHO2Q0JRZ9 810 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 STILQ15468 1287 aa17.08■□□□□ 0.32
CD28-203ENST00000458610 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms