RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PIK3R5Q8WYR1 880 aa11.62□□□□□ -0.55
SCN9A-205ENST00000454569 NDRG1Q92597 394 aaKnown RBP11.62□□□□□ -0.55
SCN9A-205ENST00000454569 PIWIL1Q96J94 861 aaKnown RBP11.62□□□□□ -0.55
SCN9A-205ENST00000454569 MED10Q9BTT4 135 aa11.62□□□□□ -0.55
SCN9A-205ENST00000454569 RRAGDQ9NQL2 400 aaPredicted RBP11.62□□□□□ -0.55
SCN9A-205ENST00000454569 MTRRQ9UBK8 725 aa11.62□□□□□ -0.55
SCN9A-205ENST00000454569 COG5Q9UP83 839 aa11.62□□□□□ -0.55
SCN9A-205ENST00000454569 SLC27A5Q9Y2P5 690 aa11.62□□□□□ -0.55
SCN9A-205ENST00000454569 PAXBP1Q9Y5B6 917 aa11.62□□□□□ -0.55
SCN9A-205ENST00000454569 PCDHA11Q9Y5I1 949 aa11.62□□□□□ -0.55
SCN9A-205ENST00000454569 COL4A4P53420 1690 aaPredicted RBP11.62□□□□□ -0.55
SCN9A-205ENST00000454569 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.61□□□□□ -0.55
SCN9A-205ENST00000454569 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.61□□□□□ -0.55
SCN9A-205ENST00000454569 HHLA1C9JL84 531 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 PJA2O43164 708 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 NUDT7P0C024 238 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 H2AFZP0C0S5 128 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 CCDC175P0C221 793 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 MMP8P22894 467 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 BMP8BP34820 402 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 GLUD2P49448 558 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 NDUFV1P49821 464 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 MAP3K7CLP57077 242 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 PTPN14Q15678 1187 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 SDHAF4Q5VUM1 108 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 ZNF280DQ6N043 979 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 ANKS3Q6ZW76 656 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 H2AFVQ71UI9 128 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 VPS36Q86VN1 386 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 PHF13Q86YI8 300 aaPredicted RBP11.61□□□□□ -0.55
SCN9A-205ENST00000454569 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 TMEM35BQ8NCS4 154 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 CLEC4CQ8WTT0 213 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 POF1BQ8WVV4 589 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 DUSP16Q9BY84 665 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 TRIM7Q9C029 511 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 OSGEPQ9NPF4 335 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 AAASQ9NRG9 546 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 KRT82Q9NSB4 513 aa11.61□□□□□ -0.55
SCN9A-205ENST00000454569 ANAPC1Q9H1A4 1944 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 TCRBV5S1A1TA0A578 114 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 ARHGEF37A1IGU5 675 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 MTMR11A4FU01 709 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 OR6C75A6NL08 312 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 HIDE1A8MVS5 230 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 C5orf67F2Z3F1 127 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 RFXAPO00287 272 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 AP1G2O75843 785 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 SEC24AO95486 1093 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 RRM1P23921 792 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 PPM1AP35813 382 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 ERVK-21P61565 698 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 KRT83P78385 493 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 TSPY1Q01534 308 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 ROR1Q01973 937 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 PDCLQ13371 301 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 ARSIQ5FYB1 569 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 SLC8B1Q6J4K2 584 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 KIAA1841Q6NSI8 718 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 KIAA1328Q86T90 577 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 METTL3Q86U44 580 aaKnown RBP11.6□□□□□ -0.55
SCN9A-205ENST00000454569 PIGZQ86VD9 579 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 CPNE8Q86YQ8 564 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 ZNF454Q8N9F8 522 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 GPR152Q8TDT2 470 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 KCND1Q9NSA2 647 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 ABI2Q9NYB9 513 aaPredicted RBP11.6□□□□□ -0.55
SCN9A-205ENST00000454569 MYO1AQ9UBC5 1043 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 BACE2Q9Y5Z0 518 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 SZT2Q5T011 3432 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 OBSL1O75147 1896 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 DENND4CQ5VZ89 1909 aa11.6□□□□□ -0.55
SCN9A-205ENST00000454569 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 E5RJQ4 531 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 H7C4K7 107 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 FANCGO15287 622 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 TEX28O15482 410 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 BUB1O43683 1085 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 CXCL14O95715 111 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 LSM8O95777 96 aaKnown RBP11.59□□□□□ -0.55
SCN9A-205ENST00000454569 CNPP09543 421 aaKnown RBP11.59□□□□□ -0.55
SCN9A-205ENST00000454569 SPATA31D3P0C874 917 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 CTSAP10619 480 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 CPB1P15086 417 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 NPR3P17342 541 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 NSFP46459 744 aaKnown RBP11.59□□□□□ -0.55
SCN9A-205ENST00000454569 RPL34P49207 117 aaKnown RBP11.59□□□□□ -0.55
SCN9A-205ENST00000454569 KRT17Q04695 432 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 BST2Q10589 180 aaKnown RBP11.59□□□□□ -0.55
SCN9A-205ENST00000454569 GPR17Q13304 367 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 TAF5Q15542 800 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 DDR2Q16832 855 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 GPR153Q6NV75 609 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 SPATA31D4Q6ZUB0 917 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 ERICH1Q86X53 443 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 XYLT1Q86Y38 959 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 TDHQ8IZJ6 230 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms